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- No viable poses
- Nobody
- Nvidia Kernel Modules
- OCI:Create account
- OCI:More work
- OCI:Set up account
- OCI:install client locally
- OCI Slurm Autoscaling
- ODOSOS
- OEChem
- OGS/GE
- OUTDOCK 3.7
- Official file locations
- Old Main
- Olivier's way of computing novelty
- Omega
- Omega.parm
- Omega.py
- One page paper
- One time funky gene name cleanup
- Ontology
- OpenBabel
- OpenEye
- OpenSGE
- Open Source Software
- Open Source by Pharma
- Open data
- Open source
- Open standards
- Openeye python libraries
- Oracle scraps
- Orienting the Ligand
- Orphan drug
- Orphan target
- Other Useful Stuff
- Other docking servers
- Other tools
- Otrs maintenance
- Output
- PAINS
- PBSA Score
- PDB
- PDB surface points for figures
- PIN Policy
- Parallel Processing
- Parameter Files
- Parameter Parser
- Partial indexes
- Particle Shape Calculator for CCDC/Mercury
- Pattern and reaction curation
- Performance testing
- Performing a Query on 22B Molecules
- Periodic system maintenance
- Personal backup disk
- Peter Ertl
- Pharmacophore-based methods
- Phenix
- Physical property space
- Pipeline pilot
- Pka
- Plop
- Portal system
- Portland Group notes
- PostgreSQL
- PostgreSQL configuration
- Ppilot
- Predict protein function by docking
- Prepare a receptor with a cofactor for docking
- Preparing dockfiles using TLDR
- Preparing the ligand
- Preparing the protein
- Privacy policy
- Private addresses
- Problematic Machines
- Programming DOCK 3.8
- Programs that work well with ZINC15
- Properties
- Protein-Protein Docking
- Protein Target Preparation
- Protein Target Preparation Updated
- Pruning the conformation tree
- Psicquic channels
- Psql idioms
- PubChem in ChEMBL
- Public databases
- Public face
- Public servers 2021
- PuppetTricks
- Pushing Docker Image To AWS
- PyMol
- Pymol background
- Python
- Python DOCK3.8
- Qconf-mrqs
- Qnifft DOCK 3.6 conversion
- Qnifft compile, run
- Quartzy and BearBuy
- Querying All Arthor Databases With Python
- Question marks
- Queues
- Quick Search Bar
- Quotas
- RDKit
- ROCS
- Rack Power (PDUs)
- RdKit idioms
- Rdkit hlogp batch.py
- Re-scoring
- Reactive groups
- Reactivity axis
- Reactome integration
- Receptors
- Reformatting a USB drive
- Reimbursement Instructions
- Remote Procedure Calls
- Remote client idioms
- Remote control your virtual box vm
- Removing Spheres (The Chase Method)
- Renew Schrodinger Licenses
- Renewing Puppet Certificates
- Repackaging DB2 DOCK38
- Replacing failed disk on Server
- Requests for ZINC
- Rescoring with DOCK 3.7
- Rescoring with PLOP
- Resetting a computer
- Resources
- Restartable DOCK37
- Retrosynthetic analysis
- Ring SQL query
- Rpi
- Rsyncing zinc15
- Runall.sh
- Running DOCK
- Running DOCK 3.7
- Running docking 3.7
- SDF
- SEA15 idioms
- SELinux notes
- SGE Cluster Docking
- SGE idioms
- SGE notes
- SMARTS
- SMILES
- SSH broken pipe error
- SUBDOCK DOCK3.8
- SVN
- Sample Additional Ring Puckers
- Scaffold hopping
- Schrodinger
- SciFinder
- Scoreopt
- Scoring
- Screen
- Screen3d
- Scripted testing for aggregators
- Sea16 installment
- Sea16 restart
- Sea cut sum
- Search
- Search zinc22.py
- Security Q&A
- Selecting tranches in ZINC22
- Self-Signed SSL Certificate / Certbot
- Server Room Machines
- Set up a Server
- Set up a database server
- Set up a new Desktop
- Set up chimerax for use with tldr
- Setting Up An Automatic SSH Tunnel To Epsilon
- Setup ZINC22 database on Server
- Shape based methods
- Sharing file systems with nfs server and mounting file systems with nfs client
- Shoichet Lab
- Shoichet Lab Photos
- Showbox
- Showsphere
- Similar products
- Singularity
- Slurm
- Slurm Installation Guide
- SmallWorld Documentation for Future Developer
- Smallworld and Arthor Databases
- Smiles update
- So you want to set up a lab
- Software Raid
- Software upgrades
- Solvgrid
- Solvmap
- Sphere Matching
- Sphere Selector
- Sphgen
- Splitdb.py
- Ssh-agent
- Ssh tunnel (Trent's way)
- Sshkey policy
- Standard disclaimer
- Standup tuesday
- Stopping spam subscribes on mailman
- Strain Filtering
- Structure Based Drug Design
- Structure based drug design
- Structure based ligand discovery
- Subset download
- Substance properties
- Substructure searching
- Suggestion box
- Sun Grid Engine (SGE)
- Supported platforms for DOCK 3.7
- Switch-4-1
- Switch-5-1
- Switch-6-1 and Switch-7-1
- Switch Configuration
- Switch Setup
- SynthI
- Synthesia
- Sysadmin
- Sysadmin-quotas
- Sysadmin idioms
- TC analog searching in ZINC
- THC
- THC:FAQ
- TLDR
- TLDR:Library Enumeration
- TLDR:arthorbatch
- TLDR:bbfilter
- TLDR:bioisostere
- TLDR:bootstrap1
- TLDR:bootstrap2
- TLDR:decoygen
- TLDR:enumeration
- TLDR:extrema
- TLDR:newbuild3d
- TLDR:strain
- TLDR:swbatch
- Tack Kuntz
- Target
- Target based
- Targets
- Tau
- Tcte
- Terms And Conditions
- Testing zinc21
- The 2014 migration
- The Lab Windows VM and VirtualBox
- The building of zinc-22
- The global war on error
- There must be 5 ways to kick zinc
- Threaded Jobs on the Cluster
- Tin jji
- To determine the make and model of a machine
- To resize a virtual drive
- Tomcat Installation
- Tomcat Installation on CentOS 6
- Tomcat on n-1-136
- Tool-selector
- Tool1
- Tool2
- Tools18:about
- Tools18:credit
- Tools18:help
- Tools18:usage
- Tools for protein and ligand analysis
- Torsion against CSD visualize with Maestro
- Tranche Browser
- Transporters server
- Travel Depth
- Trent scripts
- Tropical Diseases
- Troubleshooting - Puppet Failed to generate additional resources using 'eval generate: SSL connect returned=1'
- Tudor Oprea
- Tunnel how to
- Tutorial on running DOCK3.7 with GIST
- Tutorial on running DOCK3.7 with blury-GIST
- Tutorial on running Molecular Dynamics for GIST grid generation
- Tutorial on running Molecular Dynamics for GIST grid generation with scripts
- Tutorial on running Molecular Dynamics for GIST grid generation with scripts 2
- UCSF
- UCSF Strain Filtering
- UCSF ZINC License
- UCSF subsets
- Ucsfdock
- Understanding MakeDOCK, which automates sphere and grid generation
- Understanding SSD: Solid State Drives
- University of Toronto
- Unix disk partition
- Unpack-repack
- Updating Rdkit
- Upgrade sqlite3
- Upload Wizard
- Useful Websites
- Useful chimera commands
- User Reported Problems
- Using AWS Setup For Cloud Computation
- Using SGE cluster
- Using Wynton
- Using molgrep to search ZINC
- Using thin spheres in DOCK3.7
- VNC Display
- Vbox windows
- Vdw.defn
- Version control
- ViewDock
- Vim
- Virsh commands
- Virtual library
- Virtual screening
- Visualize docking grids
- Visualizing delphi
- WINC annotations
- Web Services Description
- Web Tools
- Weekly office hours
- Welcome group members
- Welcome web user
- What's new in DOCK 6.0
- What Can Dock Do
- What does DOCK do?
- What is loaded in ZINC?
- Which genes do what?
- Whole Library TC to Knowns Calculations
- Why Loading ZINC Is So Slow
- Why are imines bad?
- Workflow
- Workstation Install
- Worldwide ZINC
- Wuxi make-on-demand
- Wynton & BKS
- XML RPC Procedures
- XML RPC Services
- Yu Chen's notes
- ZINC
- ZINC-22-Growth
- ZINC-22:One time rearrangement Jan 25 2022
- ZINC-22:Revision of Feb 1 2022
- ZINC-22:Revision of Feb 23
- ZINC-22:Select chemical space for docking
- ZINC-22 Clean Up in Jan 2022
- ZINC-22 news of Feb-22
- ZINC-22 news of Jan-22
- ZINC-22 news of Mar-22
- ZINC-22 news of May-16-2024
- ZINC-news-2010
- ZINC10:Release notes
- ZINC12