Category:Cluster: Difference between revisions
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* Cluster 7: default for new users. Many things work here, and all of Cluster 2 is accessible read-only from Cluster 7. | * Cluster 7: default for new users. Many things work here, and all of Cluster 2 is accessible read-only from Cluster 7. | ||
* Cluster 8: aka CoreHPC/FAC. Katie now has docking and 3D building working there. We have recently expanded to 50 TB. | * Cluster 8: aka CoreHPC/FAC. Katie now has docking and 3D building working there. We have recently expanded to 50 TB. | ||
* Cluster 2: old default, most people are still using C2 | Legacy: | ||
* Cluster 2: old default, most people are still using C2. New users should generally not be added. | |||
* Cluster 3: aka Wynton, you have about 5 month left. We strongly urge you to a. consolidate your footprint as small as you can on Wynton. Backup your data to C7 or C2. | * Cluster 3: aka Wynton, you have about 5 month left. We strongly urge you to a. consolidate your footprint as small as you can on Wynton. Backup your data to C7 or C2. | ||
* Cluster 0: still in use, supports DUDE and not a lot else. | * Cluster 0: still in use, supports DUDE and not a lot else. | ||
* Cluster 6: aka Keiser. Rapidly shrinking. If you are still using Keiser cluster, please wind down, transfer files off, and stop. | * Cluster 6: aka Keiser. Rapidly shrinking. If you are still using Keiser cluster, please wind down, transfer files off, and stop. | ||
== Set up your own cluster == | == Set up your own cluster == | ||
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| [[Cluster 2]] || New UCSF cluster || Closed || 800/52 || 6.5 PB || No new growth. Merge into Cluster 7 | | [[Cluster 2]] || New UCSF cluster || Closed || 800/52 || 6.5 PB || No new growth. Merge into Cluster 7 | ||
|- | |- | ||
| [[Cluster 3]] || [https://salilab.org/qb3cluster UCSF Shared Cluster] aka Wynton || Closed || 18,000/250 || 6 PB || | | [[Cluster 3]] || [https://salilab.org/qb3cluster UCSF Shared Cluster] aka Wynton || Closed || 18,000/250 || 6 PB || End of life. Use cluster 7 & 8. | ||
|- | |- | ||
| [[Cluster 5]] || [https://aws.amazon.com/ Amazon Cloud] || ask John || unlimited || unlimited || Commercial. Ask us. Watch out for | | [[Cluster 5]] || [https://aws.amazon.com/ Amazon Cloud] || ask John || unlimited || unlimited || Commercial. Ask us. Watch out for runaway costs. | ||
|- | |- | ||
| [[Cluster 6]] || Mike Keiser cluster || Closed || 100/50 || 1 PB || End of life. | | [[Cluster 6]] || Mike Keiser cluster || Closed || 100/50 || 1 PB || End of life. Being merged into cluster 7. | ||
|- | |- | ||
| [[Cluster 7]] || New Cluster 7 || JJ/Khanh || 100/8 || 1 PB || | | [[Cluster 7]] || New Cluster 7 || JJ/Khanh || 100/8 || 1 PB || Default for new users | ||
|- | |- | ||
| [[Cluster 8]] || FAC/coreHPC || UCSF IT || 16,000/350 || | | [[Cluster 8]] || FAC/coreHPC || UCSF IT || 16,000/350 || 50 TB on FAC || CoreHPC/FAC. Default for new users. | ||
|- | |- | ||
| [[Cluster 9]] || Offsite experimental cluster || John || 64/4 || 1 PB || off-site cluster | | [[Cluster 9]] || Offsite experimental cluster || John || 64/4 || 1 PB || off-site cluster | ||
Latest revision as of 18:17, 10 September 2026
Current Usage Narrative
As of September 9, 2026:
- Cluster 7: default for new users. Many things work here, and all of Cluster 2 is accessible read-only from Cluster 7.
- Cluster 8: aka CoreHPC/FAC. Katie now has docking and 3D building working there. We have recently expanded to 50 TB.
Legacy:
- Cluster 2: old default, most people are still using C2. New users should generally not be added.
- Cluster 3: aka Wynton, you have about 5 month left. We strongly urge you to a. consolidate your footprint as small as you can on Wynton. Backup your data to C7 or C2.
- Cluster 0: still in use, supports DUDE and not a lot else.
- Cluster 6: aka Keiser. Rapidly shrinking. If you are still using Keiser cluster, please wind down, transfer files off, and stop.
Set up your own cluster
see: So you want to set up a lab
New group members
| Cluster ID | Description | How to get started | cpu/gpu | Disk space | Notes |
|---|---|---|---|---|---|
| Cluster 0 | Legacy UCSF cluster | Closed | 300/0 | 20 TB | Legacy support. Retire asap. |
| Cluster 1 | Toronto Cluster | Closed | 448/0 | 40 TB | Defunct |
| Cluster 2 | New UCSF cluster | Closed | 800/52 | 6.5 PB | No new growth. Merge into Cluster 7 |
| Cluster 3 | UCSF Shared Cluster aka Wynton | Closed | 18,000/250 | 6 PB | End of life. Use cluster 7 & 8. |
| Cluster 5 | Amazon Cloud | ask John | unlimited | unlimited | Commercial. Ask us. Watch out for runaway costs. |
| Cluster 6 | Mike Keiser cluster | Closed | 100/50 | 1 PB | End of life. Being merged into cluster 7. |
| Cluster 7 | New Cluster 7 | JJ/Khanh | 100/8 | 1 PB | Default for new users |
| Cluster 8 | FAC/coreHPC | UCSF IT | 16,000/350 | 50 TB on FAC | CoreHPC/FAC. Default for new users. |
| Cluster 9 | Offsite experimental cluster | John | 64/4 | 1 PB | off-site cluster |
Access our clusters from secure machines only. If unsure, ask the sysadmins.
Pages in category "Cluster"
The following 18 pages are in this category, out of 18 total.