ZINC 12 curation
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Never wrote it down, so it goes
- acquire SDF
- pc2unix
- procsdf.pl <catname> <sdf_file> > a.sdf
- convert.py --i=a.sdf --o=a.ism
- sort -k 2 a.ism |head # check codes mapped
- mv a.ism ~xyz/raid8/catalog/<catname.in>
- ln -s !$ <catname>.ism
- deplete.pl <catname> < <catname>.ism
- mas.csh <catname> <catname>.ism
- NB variations based on catalog size, number of tranches
- when done, go to nfshead5
- cat done/*filt | sort > a ; mv a ~xyz/raid8/filtering/<catname>.filt
- cd ~xyz/dockenv/byvendor/.temp
- zexport.csh
- when done, go to wilco
- cd ~xyz/dockenv/byvendor ; rm -rf <catname>; mv .temp/<catname> .
- all.csh <catname> vendor
- updvendor.pl < log
- cd <catname> ; dosubset5.pl <catname> vendor
- write the vendor using the standard template.
- quarterly, update subsets