User contributions for Oliv Eidam
Jump to navigation
Jump to search
30 April 2013
- 20:4020:40, 30 April 2013 diff hist +487 Phenix No edit summary
- 18:2818:28, 30 April 2013 diff hist 0 N File:Pdb sf download.jpg No edit summary current
- 18:2118:21, 30 April 2013 diff hist +577 N Phenix Created page with "==Calculate electron densities using Phenix== Here are a couple of useful phenix commands to calculate electron densities. In docking, it is often useful to have a look at el..."
29 April 2013
- 22:5222:52, 29 April 2013 diff hist +19 Calculate DOCK6 RMSD No edit summary
- 22:5022:50, 29 April 2013 diff hist +3,005 N Calculate DOCK6 RMSD Created page with "==Calculate ligand RMSDs using DOCK6== Calculating ligand RMSDs is a tricky thing, but DOCK6 does this quite well. All you need is two ligands (with the same number of atoms..."
- 22:0822:08, 29 April 2013 diff hist +4 Tools for protein and ligand analysis No edit summary
- 22:0722:07, 29 April 2013 diff hist +2,855 N Omega.parm Created page with "==Changing settings for OMEGA (OpenEye)== You may be interested to change the default settings for OMEGA (defined in omega.py) when generating conformations for docking. Maby..."
- 22:0422:04, 29 April 2013 diff hist +145 Omega.py No edit summary
- 22:0022:00, 29 April 2013 diff hist −1,654 Omega.py No edit summary
- 21:4921:49, 29 April 2013 diff hist +495 Screen3d No edit summary
- 20:3820:38, 29 April 2013 diff hist +1,703 N Screen3d Created page with "==Sceen3d: Align ligands in 3D== This tool is useful if you want to align (superpose) conformations of a ligand (for example generated by OMEGA). Maybe you are interested to ..."
26 April 2013
- 23:4023:40, 26 April 2013 diff hist +68 Omega.py No edit summary
- 22:4222:42, 26 April 2013 diff hist +4,296 N Omega.py Created page with "==Changing settings for Omega (OpenEye)== You may be interested to change the default settings for Omega (defined in omega.py) when generating conformations for docking. Maby..."
- 19:0819:08, 26 April 2013 diff hist +156 Plop No edit summary
- 19:0319:03, 26 April 2013 diff hist +12 Plop No edit summary
- 19:0319:03, 26 April 2013 diff hist +6 Plop No edit summary
25 April 2013
- 21:3021:30, 25 April 2013 diff hist 0 Plop No edit summary
- 21:2621:26, 25 April 2013 diff hist 0 Plop No edit summary
- 21:2421:24, 25 April 2013 diff hist −40 Plop No edit summary
- 21:2321:23, 25 April 2013 diff hist +1 Plop No edit summary