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* [[:Category:DOCK |DOCK]] - molecular docking software | * [[:Category:DOCK |DOCK]] - molecular docking software | ||
* [[SEA]] - the Similarity Ensemble Approach - one application of which is drug repurposing. | * [[SEA]] - the Similarity Ensemble Approach - one application of which is drug repurposing. | ||
* [[ZINC | * [[:Category:ZINC|ZINC]] - A public access database of commercially available compounds for screening. | ||
* [[DOCK Blaster]] - A public access service for running docking screens. | * [[DOCK Blaster]] - A public access service for running docking screens. | ||
* [[DUDE]] and [[DUD]] - A Directory of Useful Decoys for benchmarking docking programs. | * [[DUDE]] and [[DUD]] - A Directory of Useful Decoys for benchmarking docking programs. | ||
Revision as of 17:14, 14 February 2014
Welcome to DISI (DISI Is Still Incomplete), documentation of the software, databases and methods of the Shoichet Lab and the fields of molecular docking and cheminformatics. We invite you to contribute once you create an account and log in to ensure proper attributions. Eligible topics include both free and commercial software, databases, papers and methods. This is not an advertising forum, but if it educates or enlightens, you are welcome.
New users click HERE. New group members click HERE.
Dock, ZINC pages, Cheminformatics including SEA, , DOCK Blaster pages, Tutorials, FAQ, Portals, Browse by Categories, Docking in general
Software and Databases
- DOCK - molecular docking software
- SEA - the Similarity Ensemble Approach - one application of which is drug repurposing.
- ZINC - A public access database of commercially available compounds for screening.
- DOCK Blaster - A public access service for running docking screens.
- DUDE and DUD - A Directory of Useful Decoys for benchmarking docking programs.
- HEI - High energy intermediates for substrate discovery and function identification.
- Aggregator Advisor- A public access database of known aggregators
- Travel Depth, QNIFFT and related software for structural analysis from the Sharp lab