Get a queuing system working

Here is how to get a queuing system up and running, our way, and integrate it with DOCK 3.7. We use free versions of SGE. We assume you have already built a computer cluster in a way that is close enough to our design that the following makes sense.

set up sgemaster

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1) Install packages: gridengine, gridengine-execd

set up sgehead

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set up individual nodes

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create queues

qconf -aq 

create groups of machines

qconf -ahgrp

authorize users

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tune by editing a dozen parameters

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run jobs

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troubleshooting

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tips and tricks

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