Category:SEA: Difference between revisions

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'''SEA''', the '''S'''imilarity '''E'''nsemble '''A'''pproach. The website is:  [http://sea.bkslab.org/ sea.bkslab.org]
'''SEA''', the '''S'''imilarity '''E'''nsemble '''A'''pproach. The website is:  [http://sea.bkslab.org/ sea.bkslab.org]
==About==
==About==
'''SEA''' relates proteins based on the set-wise chemical similarity among their ligands. It can be used to rapidly search large compound databases and to build cross-target similarity maps.
'''SEA''' relates proteins based on the set-wise chemical similarity among their ligands. It can be used to rapidly search large compound databases and to build cross-target similarity maps. It is provided by the [[Shoichet Laboratory]] in the [[Department of Pharmaceutical Chemistry]] at the University of California, San Francisco ([[UCSF]]).
== Citing SEA ==  
== Citing SEA ==  
To cite SEA, please reference Keiser MJ, Roth BL, Armbruster BN, Ernsberger P, Irwin JJ, Shoichet BK. Relating protein pharmacology by ligand chemistry. Nat Biotech 25 (2), 197-206 (2007).<ref>[http://dx.doi.org/10.1038/nbt1284 Keiser MJ, Roth BL, Armbruster BN, Ernsberger P, Irwin JJ, Shoichet BK. Relating protein pharmacology by ligand chemistry. Nat Biotech 25 (2), 197-206 (2007)]</ref>
To cite SEA, please reference Keiser MJ, Roth BL, Armbruster BN, Ernsberger P, Irwin JJ, Shoichet BK. Relating protein pharmacology by ligand chemistry. Nat Biotech 25 (2), 197-206 (2007).<ref>[http://dx.doi.org/10.1038/nbt1284 Keiser MJ, Roth BL, Armbruster BN, Ernsberger P, Irwin JJ, Shoichet BK. Relating protein pharmacology by ligand chemistry. Nat Biotech 25 (2), 197-206 (2007)]</ref>

Revision as of 22:51, 3 January 2019

SEA
SEA.jpg
Paragigm Docking
Developer Shoichet Lab
Stable Version SEA
Programming Language TBD
Dependencies TBD


SEA, the Similarity Ensemble Approach. The website is: sea.bkslab.org

About

SEA relates proteins based on the set-wise chemical similarity among their ligands. It can be used to rapidly search large compound databases and to build cross-target similarity maps. It is provided by the Shoichet Laboratory in the Department of Pharmaceutical Chemistry at the University of California, San Francisco (UCSF).

Citing SEA

To cite SEA, please reference Keiser MJ, Roth BL, Armbruster BN, Ernsberger P, Irwin JJ, Shoichet BK. Relating protein pharmacology by ligand chemistry. Nat Biotech 25 (2), 197-206 (2007).[1]

Publications

Using the SEA website

Obtaining a private copy of SEA

Other topics

References

Subcategories

This category has only the following subcategory.

S

  • SEA(1 C, 9 P)

Pages in category "SEA"

The following 9 pages are in this category, out of 9 total.