Building blocks 2026
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I have prepared some building blocks for retrosynthesis and other applications.
The BB were prepared as follows.
- we got ChemSpace (CS) and Molport (MP), two outstanding building block suppliers who were able to provide sufficient information for us to proceed.
- we break up into price range, 0-50, 50-100, 100-250, 250-500, 500-100 and then fastMADE and MADE.
- we remove molecules where there is less than 1g of stock available, or information is unknown.
- we desalt, canonicalize, and remove duplicates, and remove invalid SMILES.
- anything that fails RDKit kekulization was eliminated
- we begin with CS 0-50 and add MP 0-50 molecules not found in CS 0-50.
- then we add CS 50.1-100 and then MP 50.1-100.
- repeat with 100-250, 250-500, 500-1000, and then fastMADE and then MADE.
- these databases are then indexed in Smallworld and Arthor.
- these databases are also processed for Chemistry Commons.
- the numbers are: max price, total cumulative unique, of which from CS, of which from MP)
- 50, 253,000, 50,000, 200,000
- 100, 200,000, 50,000, 50,000
- 250, 200,000, 50,000, 50,000
- 500, 200,000, 50,000, 50,000
- 1000, 100,000, 50,000, 50,000
- fastMade, 100,000,000, 0, 0
- MADE, 1,000,000,000, 0,0