DOCK 3.8 C7

These are instructions to follow on Cluster 7 to run DOCK 3.8.

• step 1. log in to C7
• cd hdd02 # find a place to work
• mkdir docking # create an area for docking
• cd docking
• pwd

/nfs/home/xyz/hdd02/docking

• screen -S john # could also be tmux

1. set up a docking environment on C7

module load dock
echo $DOCK_INSTALL_PATH
echo $DOCKBASE

1. copy test data to my account

cp -r ${DOCK_INSTALL_PATH}/test/docking  test
cd test

1. edit file to point to my own copy

./test_subdock.sh