Cluster 7: Difference between revisions

From DISI
Jump to navigation Jump to search
mNo edit summary
Line 29: Line 29:
</source>
</source>
* To load a module(s)
* To load a module(s)
*: <source>// Single module, Long version
*: <source>// Single module
module load dock  
module load dock  


/* OR */
/* OR */


// Single module, Short version
ml dock  
ml dock  


==================================
==================================


// Multi-module, Long version
// Multi-module
module load dock python schrodinger
module load dock python schrodinger


/* OR */
/* OR */


// Multi-module, Short version
// Multi-module
ml dock python schrodinger
ml dock python schrodinger
</source>
</source>
*To List all loaded modules
*: <source>

Revision as of 23:25, 17 November 2025

Introduction

A cluster built on Rocky 9 linux distribution which is under the RHEL umbrella.

How to Request for Access

Contact a system administrator.

How to Login

  1. Remote
    ssh <user>@epsilon.compbio.ucsf.edu
  2. On-premise
    ssh <user>@login02.compbio.ucsf.edu

SLURM Nodes

CPU

GPU

gpu01


Global Modules

  • To check the list of available modules
    // Long version
    module available 
    
    /* OR */
    
    // Short version
    ml av
  • To load a module(s)
    // Single module
    module load dock 
    
    /* OR */
    
    ml dock 
    
    ==================================
    
    // Multi-module
    module load dock python schrodinger
    
    /* OR */
    
    // Multi-module
    ml dock python schrodinger
  • To List all loaded modules
    <source>