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Showing below up to 500 results in range #501 to #1,000.

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  1. How to Replace a Failed Disk
  2. How to Secure Single Mode Linux
  3. How to See What Something Resolves to
  4. How to See Who is Running the Most on a Raid
  5. How to Set Up Webalizer
  6. How to Setup / Edit Quotas
  7. How to access X11 Forwarding after becoming root
  8. How to add new users
  9. How to change the hostname of a machine
  10. How to check RAM details
  11. How to cite
  12. How to compile DOCK
  13. How to create a iso image from command line
  14. How to create a vpn/ssh tunnel
  15. How to create actives and decoys for dockopt
  16. How to do indexing, partition, and migration in Postgres 10
  17. How to do parallel search of smi files on the cluster
  18. How to do parameter scanning
  19. How to dock in DOCK3.8
  20. How to download zinc-22 using rsync
  21. How to generate an HEI database
  22. How to generate ssh keys securely
  23. How to install DOCK 3.8
  24. How to install and configure JupyterHub
  25. How to install and configure R Shiny
  26. How to install python virtualenv
  27. How to link to ZINC
  28. How to process results from a large-scale docking
  29. How to protonate a receptor for docking?
  30. How to rsync remotely to the cluster
  31. How to run DOCK with a focusing term (internal energy) included
  32. How to run and analyze a DOCK run by hand
  33. How to set up a zinc22 docking run
  34. How to spin up a new virtual machine
  35. How to use Arthor API
  36. How to use Arthor Command Line
  37. How to use Blastermaster 2.0 on UCSF computers
  38. How to use Globus
  39. How to use SmallWorld API
  40. How to use Smallworld Java Command Line
  41. How to use tar for archive & compression
  42. How to use the sed command
  43. How to write a puppet config
  44. Hpacucli
  45. Hypervisor
  46. ICD10 questions
  47. INDOCK
  48. INDOCK 3.7
  49. INDOCK for DOCK 3.6
  50. IPMI
  51. IPython Notebook
  52. IRECS
  53. Identification of Flexible Layers
  54. Identification of rigid segments
  55. If you accidentally delete a disk image while VM is still running
  56. InChIs in ZINC15
  57. Inspecting electron density maps
  58. Install Acroread
  59. Install DOCK 3
  60. Install DOCK 3.7
  61. Install DOCK 6
  62. Install Miniconda
  63. Install Phenix
  64. Install SEA
  65. Install Schrodinger Suite in local computer
  66. Install ZINC
  67. Install operating system
  68. Installer
  69. Installing AMSOL
  70. Installing DOCK6 on Apple Silicon M2
  71. Installing DOCK 6
  72. Installing New Server in Cluster
  73. Installing The 3D Pipeline ZINC22
  74. Installing libreoffice
  75. Installing msms
  76. Installing oracle
  77. Interacting with Chemaxon dataset
  78. Interaction Filtering
  79. Interactive ligands visualizer
  80. Internal Energy Calculation
  81. Investigational new drug
  82. Ipynb idioms
  83. Irwin:workshop1
  84. Irwin Lab
  85. Isotopes
  86. JUDI ONLINE INDONESIA
  87. Java & CentOS 6.3
  88. Java and R
  89. Jerome Hert
  90. Jji-ts-2d-loading
  91. Jji jeremy
  92. John's Tips
  93. John Irwin
  94. Journals
  95. JupyterNotebook
  96. JupyterNotebook Guide
  97. Jérôme Hert
  98. KEGG
  99. KVM: Live Migration of Virtual Machine
  100. Knime
  101. LSI RAID Management
  102. LUNA
  103. LVM: Logical Volume Manager
  104. Lab Security Policy
  105. Lab Virtual Machines
  106. Lab Website
  107. Lab ordering system
  108. Large-scale SMILES Requesting and Fingerprints Converting
  109. Large-scale SMILES requesting
  110. Large-scale TC Calculations
  111. Ldap admin
  112. Ldap workaround
  113. Legacy IDs in ZINC22
  114. Ligand File I/O
  115. Ligand File Input
  116. Ligand Flexibility
  117. Ligand based
  118. Ligand based methods
  119. Ligand desolvation
  120. Ligand preparation
  121. Ligand preparation - 20170424
  122. Ligand preparation 3.7
  123. Ligands
  124. Linux Permissions
  125. Linux device management
  126. List of Docking.org websites
  127. LoadingZINC15
  128. LoadingZINC21
  129. Loading And Creating ZINC Partitions Automatically
  130. Loading ZINC12
  131. LogAUC
  132. LogP vs logD
  133. Log Rotate
  134. MDL Databases available
  135. MODBASE
  136. MPose
  137. MUD - Michael's Utilities for Docking
  138. Machine reponsibilities
  139. Macromolecular Docking
  140. Mailing address for the Shoichet lab
  141. Main Page
  142. Major themes of this website
  143. Making movies
  144. Manage Lab Websites
  145. Manual Specification of Non-Rotatable Bonds
  146. Manually Synchronizing MySQL
  147. March2019 protocol
  148. Matching Sphere Scan
  149. Matt Jacobson
  150. Mem2
  151. Membrane Modeling
  152. Metabolite clustering
  153. Metabolites
  154. Metabolites databases
  155. Methods section
  156. Micromedex
  157. Minimization
  158. Minimize protein-covalent ligand complex with AMBER
  159. Minimize protein-ligand complex with AMBER
  160. Mission Bay
  161. Model ensemble setup
  162. Modeller
  163. Mol2
  164. Mol2db
  165. Mol2db2
  166. Mol2db2 Format 2
  167. Mol2db2 format
  168. Molinspiration
  169. Monitoring Memory
  170. More cool zinc15 tricks
  171. Mount smallworld disks
  172. Move foreman from sqlite to mysql
  173. Multimol2db.py
  174. Multimol2db2.py
  175. MySQL
  176. NCI Platted
  177. Nailgun
  178. Natural products
  179. Natural products database
  180. Natural products type
  181. Nchemgrids
  182. Network
  183. Network Access Control
  184. Network configuration
  185. New 3D Building On Wynton
  186. New Lab Members
  187. New drug application
  188. New hartwig libraries
  189. New it team members
  190. New zinc15 questions
  191. No viable poses
  192. Nobody
  193. Nvidia Kernel Modules
  194. OCI:Create account
  195. OCI:More work
  196. OCI:Set up account
  197. OCI:install client locally
  198. OCI Slurm Autoscaling
  199. ODOSOS
  200. OEChem
  201. OGS/GE
  202. OUTDOCK 3.7
  203. Official file locations
  204. Old Main
  205. Olivier's way of computing novelty
  206. Omega
  207. Omega.parm
  208. Omega.py
  209. One page paper
  210. One time funky gene name cleanup
  211. Ontology
  212. OpenBabel
  213. OpenEye
  214. OpenSGE
  215. Open Source Software
  216. Open Source by Pharma
  217. Open data
  218. Open source
  219. Open standards
  220. Openeye python libraries
  221. Oracle scraps
  222. Orienting the Ligand
  223. Orphan drug
  224. Orphan target
  225. Other Useful Stuff
  226. Other docking servers
  227. Other tools
  228. Otrs maintenance
  229. Output
  230. PAINS
  231. PBSA Score
  232. PDB
  233. PDB surface points for figures
  234. PIN Policy
  235. Parallel Processing
  236. Parameter Files
  237. Parameter Parser
  238. Partial indexes
  239. Particle Shape Calculator for CCDC/Mercury
  240. Pattern and reaction curation
  241. Performance testing
  242. Performing a Query on 22B Molecules
  243. Periodic system maintenance
  244. Personal backup disk
  245. Peter Ertl
  246. Pharmacophore-based methods
  247. Phenix
  248. Physical property space
  249. Pipeline pilot
  250. Pka
  251. Plop
  252. Portal system
  253. Portland Group notes
  254. PostgreSQL
  255. PostgreSQL configuration
  256. Ppilot
  257. Predict protein function by docking
  258. Prepare a receptor with a cofactor for docking
  259. Preparing dockfiles using TLDR
  260. Preparing the ligand
  261. Preparing the protein
  262. Privacy policy
  263. Private addresses
  264. Problematic Machines
  265. Programming DOCK 3.8
  266. Programs that work well with ZINC15
  267. Properties
  268. Protein-Protein Docking
  269. Protein Target Preparation
  270. Protein Target Preparation Updated
  271. Pruning the conformation tree
  272. Psicquic channels
  273. Psql idioms
  274. PubChem in ChEMBL
  275. Public databases
  276. Public face
  277. Public servers 2021
  278. PuppetTricks
  279. Pushing Docker Image To AWS
  280. PyMol
  281. Pymol background
  282. Python
  283. Python DOCK3.8
  284. Qconf-mrqs
  285. Qnifft DOCK 3.6 conversion
  286. Qnifft compile, run
  287. Quartzy and BearBuy
  288. Querying All Arthor Databases With Python
  289. Question marks
  290. Queues
  291. Quick Search Bar
  292. Quotas
  293. RDKit
  294. ROCS
  295. Rack Power (PDUs)
  296. RdKit idioms
  297. Rdkit hlogp batch.py
  298. Re-scoring
  299. Reactive groups
  300. Reactivity axis
  301. Reactome integration
  302. Receptors
  303. Reformatting a USB drive
  304. Reimbursement Instructions
  305. Remote Procedure Calls
  306. Remote client idioms
  307. Remote control your virtual box vm
  308. Removing Spheres (The Chase Method)
  309. Renew Schrodinger Licenses
  310. Renewing Puppet Certificates
  311. Repackaging DB2 DOCK38
  312. Replacing failed disk on Server
  313. Requests for ZINC
  314. Rescoring with DOCK 3.7
  315. Rescoring with PLOP
  316. Resetting a computer
  317. Resources
  318. Restartable DOCK37
  319. Retrosynthetic analysis
  320. Ring SQL query
  321. Rpi
  322. Rsyncing zinc15
  323. Runall.sh
  324. Running DOCK
  325. Running DOCK 3.7
  326. Running docking 3.7
  327. SDF
  328. SEA15 idioms
  329. SELinux notes
  330. SGE Cluster Docking
  331. SGE idioms
  332. SGE notes
  333. SMARTS
  334. SMILES
  335. SSH broken pipe error
  336. SUBDOCK DOCK3.8
  337. SVN
  338. Sample Additional Ring Puckers
  339. Scaffold hopping
  340. Schrodinger
  341. SciFinder
  342. Scoreopt
  343. Scoring
  344. Screen
  345. Screen3d
  346. Scripted testing for aggregators
  347. Sea16 installment
  348. Sea16 restart
  349. Sea cut sum
  350. Search
  351. Search zinc22.py
  352. Security Q&A
  353. Selecting tranches in ZINC22
  354. Self-Signed SSL Certificate / Certbot
  355. Server Room Machines
  356. Set up a Server
  357. Set up a database server
  358. Set up a new Desktop
  359. Set up chimerax for use with tldr
  360. Setting Up An Automatic SSH Tunnel To Epsilon
  361. Setup ZINC22 database on Server
  362. Shape based methods
  363. Sharing file systems with nfs server and mounting file systems with nfs client
  364. Shoichet Lab
  365. Shoichet Lab Photos
  366. Showbox
  367. Showsphere
  368. Similar products
  369. Singularity
  370. Slurm
  371. Slurm Installation Guide
  372. SmallWorld Documentation for Future Developer
  373. Smallworld and Arthor Databases
  374. Smiles update
  375. So you want to set up a lab
  376. Software Raid
  377. Software upgrades
  378. Solvgrid
  379. Solvmap
  380. Sphere Matching
  381. Sphere Selector
  382. Sphgen
  383. Splitdb.py
  384. Ssh-agent
  385. Ssh tunnel (Trent's way)
  386. Sshkey policy
  387. Standard disclaimer
  388. Standup tuesday
  389. Stopping spam subscribes on mailman
  390. Strain Filtering
  391. Structure Based Drug Design
  392. Structure based drug design
  393. Structure based ligand discovery
  394. Subset download
  395. Substance properties
  396. Substructure searching
  397. Suggestion box
  398. Sun Grid Engine (SGE)
  399. Supported platforms for DOCK 3.7
  400. Switch-4-1
  401. Switch-5-1
  402. Switch-6-1 and Switch-7-1
  403. Switch Configuration
  404. Switch Setup
  405. SynthI
  406. Synthesia
  407. Sysadmin
  408. Sysadmin-quotas
  409. Sysadmin idioms
  410. TC analog searching in ZINC
  411. THC
  412. THC:FAQ
  413. TLDR
  414. TLDR:Library Enumeration
  415. TLDR:arthorbatch
  416. TLDR:bbfilter
  417. TLDR:bioisostere
  418. TLDR:bootstrap1
  419. TLDR:bootstrap2
  420. TLDR:decoygen
  421. TLDR:enumeration
  422. TLDR:extrema
  423. TLDR:newbuild3d
  424. TLDR:strain
  425. TLDR:swbatch
  426. Tack Kuntz
  427. Target
  428. Target based
  429. Targets
  430. Tau
  431. Tcte
  432. Terms And Conditions
  433. Testing zinc21
  434. The 2014 migration
  435. The Lab Windows VM and VirtualBox
  436. The global war on error
  437. There must be 5 ways to kick zinc
  438. Threaded Jobs on the Cluster
  439. Tin jji
  440. To determine the make and model of a machine
  441. To resize a virtual drive
  442. Tomcat Installation
  443. Tomcat Installation on CentOS 6
  444. Tomcat on n-1-136
  445. Tool-selector
  446. Tool1
  447. Tool2
  448. Tools18:about
  449. Tools18:credit
  450. Tools18:help
  451. Tools18:usage
  452. Tools for protein and ligand analysis
  453. Torsion against CSD visualize with Maestro
  454. Tranche Browser
  455. Transporters server
  456. Travel Depth
  457. Trent scripts
  458. Tropical Diseases
  459. Troubleshooting - Puppet Failed to generate additional resources using 'eval generate: SSL connect returned=1'
  460. Tudor Oprea
  461. Tunnel how to
  462. Tutorial on running DOCK3.7 with GIST
  463. Tutorial on running DOCK3.7 with blury-GIST
  464. Tutorial on running Molecular Dynamics for GIST grid generation
  465. Tutorial on running Molecular Dynamics for GIST grid generation with scripts
  466. Tutorial on running Molecular Dynamics for GIST grid generation with scripts 2
  467. UCSF
  468. UCSF Strain Filtering
  469. UCSF ZINC License
  470. UCSF subsets
  471. Ucsfdock
  472. Understanding MakeDOCK, which automates sphere and grid generation
  473. Understanding SSD: Solid State Drives
  474. University of Toronto
  475. Unix disk partition
  476. Unpack-repack
  477. Updating Rdkit
  478. Upgrade sqlite3
  479. Upload Wizard
  480. Useful Websites
  481. Useful chimera commands
  482. User Reported Problems
  483. Using AWS Setup For Cloud Computation
  484. Using SGE cluster
  485. Using Wynton
  486. Using molgrep to search ZINC
  487. Using thin spheres in DOCK3.7
  488. VNC Display
  489. Vbox windows
  490. Vdw.defn
  491. Version control
  492. ViewDock
  493. Vim
  494. Virsh commands
  495. Virtual library
  496. Virtual screening
  497. Visualize docking grids
  498. Visualizing delphi
  499. WINC annotations
  500. Web Services Description

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