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Showing below up to 500 results in range #1 to #500.
- 2dload
- 2dload.py
- 3D In Cori
- 3D Pipeline Explanation
- AB3
- AB3 Developer Notes
- ABBB
- ABBBR
- AMBER Score
- AMIS:Gene
- AWS
- AWS:Track costs
- AWS:Upload docking files to aws
- AWS Auto Scaling
- AWS DOCK Environment Setup Advanced Usage
- Activity data
- Adding Static Waters to the Protein Structure
- Adding memory to a virtual machine
- Adverse
- Aggregators
- All About DB2 Files
- Allosteric sites
- Allowing NFS through iptables/firewalld
- Amsol 7 patch
- Analyze ligand geometries using the Cambridge Structural Database (CSD)
- Analyzing DOCK 3.7 Results
- Anchor and Grow
- Another get poses.py
- Another getposes.py
- Api15
- Applications of DOCK
- Are critical points/spheres supported in my version of DOCK?
- Arkeia
- Assay Kits
- Asthma
- Atom Definition Rules
- AutoQSAR/DeepChem for billions of molecules
- Automating purchasability
- Automount/autofs
- BKS Networks
- BKS Oracle 10.2.0.1.0 LOG
- BKS lab Structure preparation
- Backup Scheme
- Basic Installation/Configuration of Server
- Ben DOCKAWS Notes
- Best:Desktop Usage
- Best database to screen
- Beta-setup
- Bioisostere Tool
- Bioisosteres
- Blacklist
- Blah
- Blastermaster (pydock3 script)
- Bonded Network Connections
- Bootstrap AUC
- Broken molecules 2017
- Btz
- Build ChEMBL for SEA
- Build new dock64 docker image
- Bump Filter
- CB DOCK 3.8 tutorial
- CB Iridium
- CCP4
- CLI Enumeration
- Cactvs
- Calculate DOCK6 RMSD
- Calculate ECFP4 using RDKit
- Calculate NPR values & Generate Heatmap
- Calculate RMSD between two sets of molecules (eg, Crystal pose vs. docked pose)
- Can DOCK6 write an info file as DOCK4 did?
- Cassidy clustering
- Catalyst
- Caveat Emptor
- CentOS 7 Base.repo
- Centos
- Cert-workaround
- Certificate
- ChEMBL
- ChEMBL API
- ChEMBL errata
- Cheat sheet
- Chem.defn
- Chem match.tbl
- Chembl2pdb
- Chembl filter out
- Chemdraw figure preparation
- Chemgrid
- Chemical Matching
- Chemistry commons Notes
- Chemoinformatics Waiver Wire
- Chemspace API
- Chimera Tutorial (AMPC)
- Chimera Tutorial (Delta opioid receptor)
- Choosing a subset
- Classic Dock References
- Clinical Trials
- Clinical Trials Loading
- Clinical trials and aggregation
- Cluster Security Monitoring Tools
- Coding tips DOCK 3.7
- Coloring and Subcluster Matching
- Command Line Arguments
- Comptuer assignments
- Conda environment issue
- Configure new disk
- Configuring an OpenSSH Server
- Contact
- Contact Score
- Continuous Score
- Continuous curation
- Contract Research Organizations
- Control of bkslab.org
- Conversion of .rxn files to reaction SMARTS
- Convert CD to an ISO Image
- Converting SMILES to Kekule Format
- Copy protect in google docs
- Copying files
- Covalent Library Preparation 2024
- Covalent library preparation 2023
- Covid19
- Create an aws ec2 image
- Create decoy tables
- Create new user
- Create venv
- Creating Maps on SmallWorld
- Creating clinical name mappings
- Critical Points
- Cron
- Curating AMIS
- Curating reactions
- Curation of ZINC-22 3D
- Current NFS Mounts
- DB2 File Format
- DNS Notes
- DOCK3.7 INDOCK Minimization Parameter
- DOCK38:Job configuration
- DOCK 3.5 Score
- DOCK 3.7 2016/09/16 abl1 Tutorial
- DOCK 3.7 2016/09/16 abl1 Tutorial(building)
- DOCK 6.9
- DOCK Blaster:1157
- DOCK Blaster:2389
- DOCK Blaster:50826
- DOCK Blaster:Alpha Test
- DOCK Blaster:CPU Time
- DOCK Blaster:Calibration docking
- DOCK Blaster:Download files
- DOCK Blaster:Failure with PDB code
- DOCK Blaster:Initial Evaluation
- DOCK Blaster:Input Troubleshooting
- DOCK Blaster:Interpreting Results
- DOCK Blaster:Other Input Options
- DOCK Blaster:Other Options
- DOCK Blaster:Philosophy
- DOCK Blaster:Prepare Ligand
- DOCK Blaster:Reliability
- DOCK Blaster:Results
- DOCK Blaster:Results Browser
- DOCK Blaster:Sample Data
- DOCK Blaster:Sample data
- DOCK Blaster:Suggestions
- DOCK Blaster:Technical Details
- DOCK Blaster:Timings
- DOCK Overview
- DOCK memory and CPU benchmark
- DOCK on cygwin
- DOCKovalent cysteine inhibitor design tutorial
- DOCKovalent linker design tutoral
- DOCKovalent linker design tutorial
- DOCKovalent lysine inhibitor design tutorial
- DOCKovalent lysine inihibitor design tutorial
- DOWNLOAD PKV GAMES APK ANDROID IOS
- Data Sources for ZINC15
- Database Filter
- Database Preparation
- Datawarrior
- Daylight
- Debugging
- Dell PowerConnect 6248 Switch
- Dependencies
- Deploy SEA from github via puppet
- Dimorphite-DL
- Disk Quotas
- Disk full
- Dock development
- Dockable metabolites libraries
- Docking.org
- Docking.org management
- Docking Analysis in DOCK3.8
- Docking configuration
- Docking for experts
- Docking for non-experts
- Docking in AWS With DOCK 3.8
- Docking programs
- Docktools
- Download by catalog
- Downloading purchasing information
- DrugBank
- Drugs
- Drugs sans targets
- Drupal
- DxTRx
- EMolecules
- Editing VMs with virsh
- Ellman libraries
- Enable su
- Enabling Bitlocker Encryption on Windows 10
- Enabling IP routing
- Enm explorer
- Enzyme Specificity Project
- Erice:Feynman hall
- Erice:Library
- Erice:Madonna room
- Erice:San domenico
- Erice:Tower room
- Example of Disorder
- Extended Search of Analogs via Bioisosteric Replacements
- FAQ:AMBERHOME
- FAQ:MPICH2
- FAQ:mmolex
- FEP+ for GPCR
- Failures of ECFP4 Part 1
- FastROCS Server
- Features of your target structure
- Filter.py:
- Filtering ligands for novelty
- Find
- Firewalld
- Flash on Linux
- FlexPepDock
- Flex drive.tbl
- Flexibase Format
- Flexible Docking
- Flexible Docking: tarting and thin spheres
- Flexible docking code
- Flushing the cache
- Forgotten root password
- Format And Mount local2
- Format Conversion
- Formatting an drive for use in Linux
- GPCR Waiver Wire
- GPU DOCK
- General Information
- General zinc15 curation
- Generating Decoys (DUDE-Z)
- Generating decoys (DUDE-Z)
- Generating decoys (Reed's way)
- Generating extrema set
- Genes
- Genes with no purchasable ligands
- Get custom library
- Get msms
- Getting started with the dock blaster toolchain
- Getting starting in irwinlab
- Global Matching Sphere Optimization
- Globus Curator's Guide
- Good binding site
- Google patents
- Google sheets hit picking
- Gpus
- Grant number
- Greatest hits
- Grid-convert
- Grid Based Score
- HMDB
- HP Computer Startup Issues
- HP Pro Network Switches
- HTTPD Semaphore/Mutex Lock Problem
- Hawkins GB/SA Score
- Heather's notes
- Heatmap tool
- How I Migrated Wiki from Centos 6 to Centos 7
- How To Connect To Printers
- How To Load New ZINC Databases
- How to Backup a Hypervisor
- How to Change the Password for a User Command Line LDAP:
- How to Check Harddrive information
- How to Create Cluster 7 (Ubuntu 20.04)
- How to Create Encrypted Password
- How to Create a Hypervisor
- How to Expand the Hard Drive Size of a VM
- How to Fix Monitor Outputting "OUT OF RANGE SIGNAL, CANNOT DISPLAY VIDEO MODE"
- How to Fix the VNC Viewer in Foreman
- How to Format an External Hard Drive on Linux that is compatible with other OS
- How to Get Minicom to Work on a Mac
- How to Install Nagios
- How to Install SmartsEditor on CentOS6
- How to Install a Desktop on Cluster 2
- How to Install an LDAP 389 Master Server
- How to Make Your Own yum Repo
- How to Migrate a Virtual Machine
- How to Print Screen on a Mac
- How to Relay Emails to Gmail
- How to Replace a Failed Disk
- How to Secure Single Mode Linux
- How to See What Something Resolves to
- How to See Who is Running the Most on a Raid
- How to Set Up Webalizer
- How to Setup / Edit Quotas
- How to access X11 Forwarding after becoming root
- How to add new users
- How to change the hostname of a machine
- How to check RAM details
- How to cite
- How to create a iso image from command line
- How to create a vpn/ssh tunnel
- How to create actives and decoys for dockopt
- How to do indexing, partition, and migration in Postgres 10
- How to do parallel search of smi files on the cluster
- How to do parameter scanning
- How to download zinc-22 using rsync
- How to generate ssh keys securely
- How to install and configure JupyterHub
- How to install and configure R Shiny
- How to install python virtualenv
- How to link to ZINC
- How to process results from a large-scale docking
- How to protonate a receptor for docking?
- How to run DOCK with a focusing term (internal energy) included
- How to spin up a new virtual machine
- How to use Arthor API
- How to use Arthor Command Line
- How to use Blastermaster 2.0 on UCSF computers
- How to use Globus
- How to use SmallWorld API
- How to use Smallworld Java Command Line
- How to use tar for archive & compression
- How to use the sed command
- How to write a puppet config
- Hpacucli
- ICD10 questions
- IRECS
- Identification of Flexible Layers
- Identification of rigid segments
- If you accidentally delete a disk image while VM is still running
- InChIs in ZINC15
- Inspecting electron density maps
- Install Acroread
- Install DOCK 3
- Install DOCK 6
- Install Miniconda
- Install Phenix
- Install Schrodinger Suite in local computer
- Installer
- Installing AMSOL
- Installing DOCK6 on Apple Silicon M2
- Installing New Server in Cluster
- Installing The 3D Pipeline ZINC22
- Installing libreoffice
- Installing msms
- Installing oracle
- Interacting with Chemaxon dataset
- Interaction Filtering
- Interactive ligands visualizer
- Internal Energy Calculation
- Ipynb idioms
- JUDI ONLINE INDONESIA
- Java & CentOS 6.3
- Java and R
- Jerome Hert
- Jji-ts-2d-loading
- Jji jeremy
- John's Tips
- Journals
- JupyterNotebook
- JupyterNotebook Guide
- Jérôme Hert
- KEGG
- KVM: Live Migration of Virtual Machine
- Knime
- LSI RAID Management
- LUNA
- LVM: Logical Volume Manager
- Lab Virtual Machines
- Lab Website
- Lab ordering system
- Large-scale SMILES Requesting and Fingerprints Converting
- Large-scale SMILES requesting
- Ldap admin
- Ldap workaround
- Ligand File I/O
- Ligand based methods
- Ligand desolvation
- Ligand preparation - 20170424
- Linux Permissions
- Linux device management
- List of Docking.org websites
- LoadingZINC15
- LoadingZINC21
- Loading And Creating ZINC Partitions Automatically
- Loading ZINC12
- LogAUC
- LogP vs logD
- Log Rotate
- MODBASE
- Machine reponsibilities
- Macromolecular Docking
- Mailing address for the Shoichet lab
- Major themes of this website
- Making movies
- Manage Lab Websites
- Manual Specification of Non-Rotatable Bonds
- Manually Synchronizing MySQL
- March2019 protocol
- Matching Sphere Scan
- Mem2
- Membrane Modeling
- Metabolite clustering
- Metabolites
- Methods section
- Micromedex
- Minimization
- Minimize protein-covalent ligand complex with AMBER
- Minimize protein-ligand complex with AMBER
- Model ensemble setup
- Mol2
- Mol2db2 Format 2
- Monitoring Memory
- More cool zinc15 tricks
- Mount smallworld disks
- Move foreman from sqlite to mysql
- NCI Platted
- Nailgun
- Natural products
- Natural products type
- Nchemgrids
- Network Access Control
- Network configuration
- New 3D Building On Wynton
- New hartwig libraries
- New it team members
- New zinc15 questions
- No viable poses
- Nobody
- Nvidia Kernel Modules
- OCI:Create account
- OCI:More work
- OCI:install client locally
- OCI Slurm Autoscaling
- Official file locations
- Olivier's way of computing novelty
- Omega
- Omega.parm
- Omega.py
- One page paper
- One time funky gene name cleanup
- Ontology
- OpenBabel
- OpenSGE
- Open Source Software
- Open Source by Pharma
- Open data
- Open source
- Open standards
- Openeye python libraries
- Oracle scraps
- Orphan target
- Other docking servers
- Otrs maintenance
- Output
- PAINS
- PBSA Score
- PDB
- PIN Policy
- Parallel Processing
- Parameter Files
- Parameter Parser
- Partial indexes
- Particle Shape Calculator for CCDC/Mercury
- Pattern and reaction curation
- Performance testing
- Performing a Query on 22B Molecules
- Personal backup disk
- Phenix
- Physical property space
- Pka
- Portland Group notes
- PostgreSQL configuration
- Predict protein function by docking
- Prepare a receptor with a cofactor for docking
- Preparing dockfiles using TLDR
- Preparing the ligand
- Privacy policy
- Private addresses
- Problematic Machines
- Programming DOCK 3.8
- Programs that work well with ZINC15
- Properties
- Protein-Protein Docking
- Protein Target Preparation Updated
- Pruning the conformation tree
- Psicquic channels
- Psql idioms
- PubChem in ChEMBL
- Public face
- Public servers 2021
- PuppetTricks
- Pushing Docker Image To AWS
- PyMol
- Pymol background