Difference between revisions of "ZINC Subset DB2 file locations"

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(Created page with "On the UCSF cluster: /raida/db/rgc/frags-now-marvin Fragments available now /raida/db/rgc/frags-all-marvin All fragments available now or on-demand quickly /raida/db/rgc/lead...")
 
 
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On the UCSF cluster:
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Cluster 0 is no longer in use. Please review this for a revision or remove it completely.
  
/raida/db/rgc/frags-now-marvin Fragments available now
+
-Khanh
/raida/db/rgc/frags-all-marvin All fragments available now or on-demand quickly
 
/raida/db/rgc/leads-now-marvin Leadlike available now
 
/raida/db/rgc/leads-rest-marvin The rest of leadlike (run both to get both)
 
  
Replace /raida/db/ with /nfs/db/users/ if you are using the Toronto cluster.
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On [[Cluster 0]]:
 +
 
 +
/raida/db/rgc/frags-now-marvin Fragments available now
 +
/raida/db/rgc/frags-all-marvin All fragments available now or on-demand quickly
 +
/raida/db/rgc/leads-now-marvin Leadlike available now
 +
/raida/db/rgc/leads-rest-marvin The rest of leadlike (run both to get both)
 +
 
 +
Replace /raida/db/ with /nfs/db/users/ if you are using [[Cluster 1]].
  
 
Please cite the Coleman, Sterling & Weiss paper on using Marvin if you dock against these subsets Citations for DOCK3.7.
 
Please cite the Coleman, Sterling & Weiss paper on using Marvin if you dock against these subsets Citations for DOCK3.7.
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{{Template:Coleman}}
 
{{Template:Coleman}}
 
[[Category:DOCK 3.7]]
 
[[Category:DOCK 3.7]]
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[[Category:NEED ATTENTION]]

Latest revision as of 19:05, 10 January 2019

Cluster 0 is no longer in use. Please review this for a revision or remove it completely.

-Khanh

On Cluster 0:

/raida/db/rgc/frags-now-marvin Fragments available now
/raida/db/rgc/frags-all-marvin All fragments available now or on-demand quickly
/raida/db/rgc/leads-now-marvin Leadlike available now
/raida/db/rgc/leads-rest-marvin The rest of leadlike (run both to get both)

Replace /raida/db/ with /nfs/db/users/ if you are using Cluster 1.

Please cite the Coleman, Sterling & Weiss paper on using Marvin if you dock against these subsets Citations for DOCK3.7.

http://i.creativecommons.org/l/by-sa/3.0/88x31.png

This work is licensed under the Creative Commons Attribution-ShareAlike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/3.0/ This page is adapted from "DOCK3.7 Documentation" by Ryan G. Coleman. Based on a work at https://sites.google.com/site/dock37wiki/.