ZINC22:Checkin 3D: Difference between revisions

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This is how to check in your 3D contribution to ZINC22 3D to UCSF.  
This is how to check in your 3D contribution to ZINC22 3D to UCSF.  
Your contribution will be acknowledged and redistributed to all ZINC22 mirror sites.  
Your contribution will be acknowledged and redistributed to all ZINC22 mirror sites.  
* back to [[ZINC22:Building_3D]]


* 0. request credentials from chemistry4biology at gmail.com
* 0. request credentials from chemistry4biology at gmail.com
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back to [[ZINC22:Building_3D]]
[[Category:ZINC22]]
[[Category:ZINC22]]

Latest revision as of 19:13, 28 January 2021

This is how to check in your 3D contribution to ZINC22 3D to UCSF. Your contribution will be acknowledged and redistributed to all ZINC22 mirror sites.

  • 0. request credentials from chemistry4biology at gmail.com

you will get: userid and portalid

  • 1. set up a tunnel
ssh -vCL localhost:2222:gimel:22 -D1080 <userid>@<portalid>.compbio.ucsf.edu
  • 2. set up rsync script:
setenv i $1
rsync -ar -e "ssh -p 2222" -arv $i/out <userid>@localhost:/nfs/exb/zinc22/tarballs/$i.out
  • 3. rsync your output
  • say your output is in H25P250.smi.batch-3d.d, then
csh rsync H25P250.smi.batch-3d.d
  • you can do this near the end and again after this tranche is finished.


back to ZINC22:Building_3D