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  • Ucsfdock
    [[Category:Deprecated]]
    41 bytes (4 words) - 22:56, 24 May 2024
  • Blastermaster2.0
    [deprecated]
    52 bytes (5 words) - 08:16, 2 September 2022
  • DUMM6
    *deprecated unused keywords (more later) 3. '''Deprecated keywords'''
    2 KB (270 words) - 20:11, 8 October 2012
  • UCSF Strain Filtering
    NOTE: This version is deprecated. The new version is 1.1 Please see [[Strain Filtering]]
    1,012 bytes (172 words) - 01:39, 15 December 2020
  • Chemistry commons Notes
    ** This will be deprecated once we switched to use postgres
    1 KB (163 words) - 18:01, 2 May 2024
  • OUTDOCK 3.7
    WARNING ---> deprecated keyword ignored: molecules_maximum WARNING ---> deprecated keyword ignored: vdw_maximum
    3 KB (392 words) - 04:33, 25 February 2014
  • HEI
    [[Category:Deprecated]]
    2 KB (252 words) - 20:26, 24 May 2024
  • ZINC subsets
    = deprecated = Greasy-leads (#4) and Big-n-greasy(#5) are deprecated. Frankly, these compounds are nothing but trouble, since they often do not
    7 KB (1,114 words) - 05:28, 14 February 2014
  • INDOCK for DOCK 3.6
    Single mode is deprecated, these parameters won't work. See [[Dock Ligand Clustering]] ...ion from each ligand atom and spreads it evenly over the molecule. This is deprecated because it does unexpected things to solvation, and will be removed entirel
    11 KB (1,394 words) - 18:09, 15 February 2014
  • 2dload
    [[Category:ZINC22]] [[Category:Deprecated]]
    5 KB (546 words) - 22:41, 13 May 2022
  • DOCK 3.6 User Manual
    | This parameter has be deprecated. Only the "search" mode is curently used. the "single" mode, which alowed
    7 KB (721 words) - 22:17, 2 January 2019
  • Init partitioned search.py (aka Search zinc22.py)
    This script will comb through our deprecated files and attempt to locate your ZINC IDs there. This script will create a
    5 KB (837 words) - 20:13, 18 February 2025
  • All About DB2 Files
    ...apped and newer db2 files no longer have them, thus "D" may now stand for "deprecated"
    5 KB (844 words) - 19:05, 11 July 2023
  • DOCK:History
    ...lter, Pre-minimization, Restrained Minimization, Miscellaneous, Bug Fixes, Deprecated Features. * amber_score as secondary score currently deprecated
    11 KB (1,545 words) - 17:01, 27 January 2021
  • GPU DOCK
    ...ry for the master score (since the master score is deprecated, this too is deprecated).
    20 KB (3,437 words) - 20:50, 22 April 2023
  • AMBER Score
    ...rform amber scoring as the secondary scoring function. This is temporarily deprecated, and using input parameter amber_score_secondary causes program termination
    8 KB (1,307 words) - 01:00, 11 March 2014
  • How to Install a Desktop on Cluster 2
    The desktop.sh script has a deprecated path regarding the repodata. The script causes the scl.repo to have a PYCU
    10 KB (1,446 words) - 23:37, 19 November 2018
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