SEA26:Annotated ligands
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Here is how you can get info about what is annotated for a target in SEA26
- a. cd /mnt/nfs/exf/SEA/sea_data/chembl36/Homo (e.g.)
- b. go to google : HTR2C ChEMBL code -> 225
- c. awk -F ‘\t’ ‘{print $5,$4}’ CHEMBL225.tsv > ~/chembl225.txt
- d. open chembl225.txt into DataWarrior, compute Tc to your query compound.
- e. compare to what is in sea16. -> solve mystery for why HTR2C is not scoring well in sea26.
We should make this work from the GUI.
- must add code to do similarity.