Official file locations

Revision as of 22:25, 3 May 2021 by Frodo (talk | contribs) (asdf)
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This document describes where files live, officially, on the cluster.

Who is responsible for these?

Are they current? do we still need them?


- Backups =

/nfs/exc/zinc22/psql-backups - TIN database backups
/nfs/exc/backups/  - infrastructure backups
/nfs/exc/bet - bet backups

By disk

50-mer tarballs

/nfs/exb/zinc22/tarballs - raw 50-mer tarballs Aug 26, 2020 to May 2021. location 1
/nfs/exc/zinc23/tarballs - raw 50-mer tarballs Mar 30, 2021 to June 2021. location 2.
/nfs/exd/zinc22/tarballs - copy (mirror) of location 1
/nfs/exe/zinc22/tarballs - copy (mirror) of location 2
/nfs/exf/zinc22/tarballs - copy (mirror) of location 3

5000-mer tarballs

/nfs/exd/zinc-22?/ - 5000-mer tarballs, location 1. t-x
/nfs/exc/zinc-22?/ - 5000-mer tarballs, location 2. h-s
/nfs/exe/zinc-22?/ - 5000-mer tarballs, location 3. a-g
/wynton/group/bks/zinc-22?/ - copy (mirror) or locations 1,2,3
Also mirrored on AWS.

We have too many old copies of files. The intent is that we use this document to control the official location of files.

By Topic





By Location

disk what notes
db2 SSD 76TB /124TB fine tranches, smallworld
db3 SSD 118TB / 124 TB work
db5 SSD 124TB / 124TB smiles, zinc22
ex9 asdfasdf lots
exa qwer34 lots
exb 275 TB / 275 TB zinc22 tarballs
exc 275 TB / 275 TB zinc22 dockable
exd 275 TB / 275TB consolidate ex1-ex8


This is where 3D databases of ZINC22 live. Within

  • The raw tarballs go in /nfs/exb/zinc22/tarballs/
  • 2D SMILES go


This is where the dockable version of zinc22 lives. It is organized by fine tranche HxxPyyy