Official file locations: Difference between revisions
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This document describes where files live, officially, on the cluster. | This document describes where files live, officially, on the cluster. | ||
= Who is responsible for these? = | |||
Are they current? do we still need them? | |||
/mnt/nfs/exc/zinc22/dude-xtract | |||
- Backups = | |||
/nfs/exc/zinc22/psql-backups - TIN database backups | |||
/nfs/exc/backups/ - infrastructure backups | |||
/nfs/exc/bet - bet backups | |||
= By disk = | |||
== 50-mer tarballs == | |||
/nfs/exb/zinc22/tarballs - raw 50-mer tarballs Aug 26, 2020 to May 2021. location 1 | |||
/nfs/exc/zinc23/tarballs - raw 50-mer tarballs Mar 30, 2021 to June 2021. location 2. | |||
/nfs/exd/zinc22/tarballs - copy (mirror) of location 1 | |||
/nfs/exe/zinc22/tarballs - copy (mirror) of location 2 | |||
/nfs/exf/zinc22/tarballs - copy (mirror) of location 3 | |||
== 5000-mer tarballs == | |||
/nfs/exd/zinc-22?/ - 5000-mer tarballs, location 1. t-x | |||
/nfs/exc/zinc-22?/ - 5000-mer tarballs, location 2. h-s | |||
/nfs/exe/zinc-22?/ - 5000-mer tarballs, location 3. a-g | |||
/wynton/group/bks/zinc-22?/ - copy (mirror) or locations 1,2,3 | |||
Also mirrored on AWS. | |||
We have too many old copies of files. The intent is that we use this document to control the official location of files. | We have too many old copies of files. The intent is that we use this document to control the official location of files. | ||
Revision as of 22:25, 3 May 2021
This document describes where files live, officially, on the cluster.
Who is responsible for these?
Are they current? do we still need them?
/mnt/nfs/exc/zinc22/dude-xtract
- Backups =
/nfs/exc/zinc22/psql-backups - TIN database backups /nfs/exc/backups/ - infrastructure backups /nfs/exc/bet - bet backups
By disk
50-mer tarballs
/nfs/exb/zinc22/tarballs - raw 50-mer tarballs Aug 26, 2020 to May 2021. location 1 /nfs/exc/zinc23/tarballs - raw 50-mer tarballs Mar 30, 2021 to June 2021. location 2. /nfs/exd/zinc22/tarballs - copy (mirror) of location 1 /nfs/exe/zinc22/tarballs - copy (mirror) of location 2 /nfs/exf/zinc22/tarballs - copy (mirror) of location 3
5000-mer tarballs
/nfs/exd/zinc-22?/ - 5000-mer tarballs, location 1. t-x /nfs/exc/zinc-22?/ - 5000-mer tarballs, location 2. h-s /nfs/exe/zinc-22?/ - 5000-mer tarballs, location 3. a-g /wynton/group/bks/zinc-22?/ - copy (mirror) or locations 1,2,3 Also mirrored on AWS.
We have too many old copies of files. The intent is that we use this document to control the official location of files.
By Topic
2D SMILES
/nfs/exb/rawsmiles/
3D
/nfs/exa/zinc22/3D
By Location
disk | what | notes |
---|---|---|
db2 | SSD 76TB /124TB | fine tranches, smallworld |
db3 | SSD 118TB / 124 TB | work |
db5 | SSD 124TB / 124TB | smiles, zinc22 |
ex9 | asdfasdf | lots |
exa | qwer34 | lots |
exb | 275 TB / 275 TB | zinc22 tarballs |
exc | 275 TB / 275 TB | zinc22 dockable |
exd | 275 TB / 275TB | consolidate ex1-ex8 |
/nfs/exb/zinc22
This is where 3D databases of ZINC22 live. Within
- The raw tarballs go in /nfs/exb/zinc22/tarballs/
- 2D SMILES go
/nfs/exc/dock/zinc22
This is where the dockable version of zinc22 lives. It is organized by fine tranche HxxPyyy