Docking tools: Difference between revisions
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* [[How to run and analyze a DOCK run by hand]] | * [[How to run and analyze a DOCK run by hand]] | ||
* [[How to generate an HEI database]] | * [[How to generate an HEI database]] | ||
* | * How to hold a [[hit picking party]] | ||
* [[Understanding MakeDOCK, which automates sphere and grid generation]] | * [[Understanding MakeDOCK, which automates sphere and grid generation]] | ||
* [[Using local Subversion Repository (SVN)]] | * [[Using local Subversion Repository (SVN)]] | ||
Revision as of 16:05, 25 August 2009
There are many tools and scripts that are used in conjunction with DOCK. Some are distributed with DOCK, while others must be sourced from third parties. This article is a stub. Please elaborate it.
DOCKtools
ZINC Database preparation tools
- RunAMSOL.csh
Michael's tools
MUD_-_Michael's_Utilities_for_Docking
Eddie's tools
You can find everything here:
3rd party tools
- How to compile DOCK
- SGE Cluster Docking
- MUD - Michael's Utilities for Docking
- Automated Database Preparation
- How to use the QB3 cluster
- How to run and analyze a DOCK run by hand
- How to generate an HEI database
- How to hold a hit picking party
- Understanding MakeDOCK, which automates sphere and grid generation
- Using local Subversion Repository (SVN)