DOCK:Problems: Difference between revisions
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* [[Problems]] - all other problems go here. | * [[Problems]] - all other problems go here. | ||
== Docking problems in general == | |||
* treatment of entropy | |||
* treatment of receptor desolvation | |||
* treatment of induced-fit effects | |||
* ligand internal energy | |||
== DOCK 3.5.54 == | == DOCK 3.5.54 == | ||
Revision as of 16:02, 7 August 2009
This is the UCSF DOCK problem page. There are other problem pages too:
- DOCK Blaster:Problems
- DUD:Problems
- DOCK:Problems
- Problems - all other problems go here.
Docking problems in general
- treatment of entropy
- treatment of receptor desolvation
- treatment of induced-fit effects
- ligand internal energy
DOCK 3.5.54
- prepare new distribution
- "collisions"
- inline out of box detection
- ligand internal energy
- write out multiple structures for PLOP