Sea16 restart: Difference between revisions
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ssh s_enkhee@gimel | ssh s_enkhee@gimel | ||
cd /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/src/seaware-academic/ | cd /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/src/seaware-academic/ | ||
source activate sea16 (if not works | source activate sea16 (if it not works: export PATH=/nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/bin:$PATH) | ||
git pull | git pull | ||
rm -rf /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/lib/python2.7/site-packages/seaserver | make clean | ||
delete sea related libraries from your site-packages folder under the conda env (rm -rf /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/lib/python2.7/site-packages/seaserver) | |||
make all | |||
kill all sea-server related processes e.g. from htop | |||
make SEAserver-start | |||
cd /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/src/seaware-academic/SEAserver | cd /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/src/seaware-academic/SEAserver | ||
python setup.py install | python setup.py install |
Revision as of 21:14, 16 March 2017
# update conda_sea16 ssh s_enkhee@gimel cd /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/src/seaware-academic/ source activate sea16 (if it not works: export PATH=/nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/bin:$PATH) git pull make clean delete sea related libraries from your site-packages folder under the conda env (rm -rf /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/lib/python2.7/site-packages/seaserver) make all kill all sea-server related processes e.g. from htop make SEAserver-start cd /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/src/seaware-academic/SEAserver python setup.py install # restart server ssh s_enkhee$n-1-110 cd /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/src/seaware-academic/ source activate sea16 (if not works, export PATH=/nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/bin:$PATH) cd SEAsever sh scripts/run-sea-server.sh # update sea16 ssh xyz@gimel cd /nfs/soft/www/apps/sea/sea16/src/seaware-academic source ../../env.csh git pull rm -rf /nfs/soft/www/apps/sea/sea16/lib/python2.7/site-packages/seaserver cd /nfs/soft/www/apps/sea/sea16/src/seaware-academic/SEAserver python setup.py install # restart server ssh www@n-1-110 cd /nfs/soft/www/apps/sea/sea16/src/seaware-academic source ../../env.csh cd SEAsever sh scripts/run-sea-server.sh # restart server ssh <superuser>@n-1-110 sudo -i screen -r screen -dR Sea (switch to sea screen) sh scripts/run-sea-server.sh # how to save the old queue data cd /nfs/soft/www/apps/sea/sea16/var/seaserver/queue mv jobs jobs.save mv tasks.sqlite tasks.sqllite.save restart sea server on n-1-110. (basically, it had too much history and that was what was slowing it down) (do on the first day of the month and rename the old one to a month version)