Quick Search Bar: Difference between revisions
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The Quick Search Bar may be used to enter free-form text to query ZINC. | |||
The goal is to offer fast google-like simplicity. | |||
The input is interpreted as follows. Wildcards are supported | |||
= Number(s) = | |||
1) If it is a number, interpret as a ZINC ID. To force this behavior, prefix with zinc: | 1) If it is a number, interpret as a ZINC ID. To force this behavior, prefix with zinc: | ||
e.g. zinc:32768 and 32768 and 32768+55535+7 and 3933993* ; are all supported | e.g. zinc:32768 and 32768 and 32768+55535+7 and 3933993* ; are all supported | ||
= Number-Number-Number = | |||
2) If it is of the form number-number-number, interpret as a CAS number. For force this behavior, prefix with cas: | 2) If it is of the form number-number-number, interpret as a CAS number. For force this behavior, prefix with cas: | ||
e.g. cas:5-6-10 and 6-54-2 and 3-5-6+3-4-2 ; are all supported | e.g. cas:5-6-10 and 6-54-2 and 3-5-6+3-4-2 ; are all supported | ||
= SMILES and SMARTS = | |||
3) If it is a valid SMILES, interpret as "90% similar to". To force this behavior, prefix with smiles: | 3) If it is a valid SMILES, interpret as "90% similar to". To force this behavior, prefix with smiles: | ||
3a) Optionally after SMILES (SMARTS) add identical, exact, substructure, 80% or 0.8 (or any value) for corresponding searches. | 3a) Optionally after SMILES (SMARTS) add identical, exact, substructure, 80% or 0.8 (or any value) for corresponding searches. | ||
Line 14: | Line 19: | ||
e.g. smiles:O=C1CCN1 substructure and smiles:O=C1CCN1 77% and C1CCNCC1 exact ; are all supported | e.g. smiles:O=C1CCN1 substructure and smiles:O=C1CCN1 77% and C1CCNCC1 exact ; are all supported | ||
= Name = | |||
4) Attempt to interpret as name of molecule. To force this behavior, prefix with name: or drug: | 4) Attempt to interpret as name of molecule. To force this behavior, prefix with name: or drug: | ||
e.g. drug:cetirizine and drug:*pram and ibuprofen ; are all supported | e.g. drug:cetirizine and drug:*pram and ibuprofen ; are all supported | ||
= Target = | |||
5) Attempt to interpret as target name. Uniprot and SwissProt codes as well as target names are supported. To force this behavior, prefix with target: | 5) Attempt to interpret as target name. Uniprot and SwissProt codes as well as target names are supported. To force this behavior, prefix with target: | ||
e.g. target:5ht1a* and hdac* and DRD2_HUMAN and Q2LFS1 ; are all supported | e.g. target:5ht1a* and hdac* and DRD2_HUMAN and Q2LFS1 ; are all supported | ||
= Catalog = | |||
6) Attempt to interpret as catalog name. To force this behavior, prefix with catalog: | 6) Attempt to interpret as catalog name. To force this behavior, prefix with catalog: | ||
e.g. ChemBridge and catalog:Enamine ; are all supported | e.g. ChemBridge and catalog:Enamine ; are all supported | ||
6a) Attempt to interpret as | 6a) Attempt to interpret as a catalog code, optionally prefixed with catalog name. Thus | ||
e.g. ChemBridge T12345 and Enamine 194394* and vendor 12345 ; are all supported. In the last case, any compound called 12345 by any vendor. | e.g. ChemBridge T12345 and Enamine 194394* and vendor 12345 ; are all supported. In the last case, any compound called 12345 by any vendor. |
Revision as of 01:53, 23 February 2012
The Quick Search Bar may be used to enter free-form text to query ZINC. The goal is to offer fast google-like simplicity. The input is interpreted as follows. Wildcards are supported
Number(s)
1) If it is a number, interpret as a ZINC ID. To force this behavior, prefix with zinc:
e.g. zinc:32768 and 32768 and 32768+55535+7 and 3933993* ; are all supported
Number-Number-Number
2) If it is of the form number-number-number, interpret as a CAS number. For force this behavior, prefix with cas:
e.g. cas:5-6-10 and 6-54-2 and 3-5-6+3-4-2 ; are all supported
SMILES and SMARTS
3) If it is a valid SMILES, interpret as "90% similar to". To force this behavior, prefix with smiles: 3a) Optionally after SMILES (SMARTS) add identical, exact, substructure, 80% or 0.8 (or any value) for corresponding searches.
e.g. smiles:O=C1CCN1 substructure and smiles:O=C1CCN1 77% and C1CCNCC1 exact ; are all supported
Name
4) Attempt to interpret as name of molecule. To force this behavior, prefix with name: or drug:
e.g. drug:cetirizine and drug:*pram and ibuprofen ; are all supported
Target
5) Attempt to interpret as target name. Uniprot and SwissProt codes as well as target names are supported. To force this behavior, prefix with target:
e.g. target:5ht1a* and hdac* and DRD2_HUMAN and Q2LFS1 ; are all supported
Catalog
6) Attempt to interpret as catalog name. To force this behavior, prefix with catalog:
e.g. ChemBridge and catalog:Enamine ; are all supported
6a) Attempt to interpret as a catalog code, optionally prefixed with catalog name. Thus
e.g. ChemBridge T12345 and Enamine 194394* and vendor 12345 ; are all supported. In the last case, any compound called 12345 by any vendor.