Sea16 restart: Difference between revisions
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<pre> | <pre> | ||
# restart conda_sea16 server | |||
ssh s_enkhee$n-1-110 | |||
cd /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/src/seaware-academic/ | |||
export PATH=/nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/bin:$PATH | |||
export PATH=/nfs/home/momeara/opt/bin:$PATH | |||
source activate sea16 | |||
cd SEAsever | |||
sh scripts/run-sea-server.sh | |||
# update conda_sea16 | # update conda_sea16 | ||
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ssh s_enkhee@gimel | ssh s_enkhee@gimel | ||
cd /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/src/seaware-academic/ | cd /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/src/seaware-academic/ | ||
export PATH=/nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/bin:$PATH | |||
export PATH=/nfs/home/momeara/opt/bin:$PATH | |||
source activate sea16 | |||
git pull | git pull | ||
make clean | make clean | ||
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kill all sea-server related processes e.g. from htop | kill all sea-server related processes e.g. from htop | ||
make SEAserver-start | make SEAserver-start | ||
# run the test to check: | |||
-> export SEA_APP_ROOT=$CONDA_PREFIX/var/seaserver | |||
-> export SEA_RUN_FOLDER=$SEA_APP_ROOT/run | |||
-> export SEA_DATA_FOLDER=$SEA_APP_ROOT/data | |||
-> python -m unittest test.test_illustrate | |||
Revision as of 16:35, 24 April 2017
# restart conda_sea16 server ssh s_enkhee$n-1-110 cd /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/src/seaware-academic/ export PATH=/nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/bin:$PATH export PATH=/nfs/home/momeara/opt/bin:$PATH source activate sea16 cd SEAsever sh scripts/run-sea-server.sh # update conda_sea16 ssh s_enkhee@gimel cd /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/src/seaware-academic/ export PATH=/nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/bin:$PATH export PATH=/nfs/home/momeara/opt/bin:$PATH source activate sea16 git pull make clean delete sea related libraries from your site-packages folder under the conda env (rm -rf /nfs/soft/www/apps/sea/conda_sea16/anaconda2/envs/sea16/lib/python2.7/site-packages/seaserver) make all kill all sea-server related processes e.g. from htop make SEAserver-start # run the test to check: -> export SEA_APP_ROOT=$CONDA_PREFIX/var/seaserver -> export SEA_RUN_FOLDER=$SEA_APP_ROOT/run -> export SEA_DATA_FOLDER=$SEA_APP_ROOT/data -> python -m unittest test.test_illustrate # update sea16 ssh xyz@gimel cd /nfs/soft/www/apps/sea/sea16/src/seaware-academic source ../../env.csh git pull rm -rf /nfs/soft/www/apps/sea/sea16/lib/python2.7/site-packages/seaserver cd /nfs/soft/www/apps/sea/sea16/src/seaware-academic/SEAserver python setup.py install # restart server ssh www@n-1-110 cd /nfs/soft/www/apps/sea/sea16/src/seaware-academic source ../../env.csh cd SEAsever sh scripts/run-sea-server.sh # restart server ssh <superuser>@n-1-110 sudo -i screen -r screen -dR Sea (switch to sea screen) sh scripts/run-sea-server.sh # how to save the old queue data cd /nfs/soft/www/apps/sea/sea16/var/seaserver/queue mv jobs jobs.save mv tasks.sqlite tasks.sqllite.save restart sea server on n-1-110. (basically, it had too much history and that was what was slowing it down) (do on the first day of the month and rename the old one to a month version)