Cluster 8: Difference between revisions
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* We collectively refer to FAC/coreHPC as "Cluster 8". | * We collectively refer to FAC/coreHPC as "Cluster 8". | ||
* | * We are attempting two strategies for cluster 8: | ||
* ZINC thus lives on our cluster ( | ** upload ZINC on the fly, dock it, and then throw it away. | ||
* The pipe to FAC is 100 Gbps, | ** nfs mount our cluster on coreHPC, data gets pulled as needed | ||
* ZINC thus lives on our cluster (currently hosted on cluster 2, cross mounted read only to cluster 7). | |||
* a copy of 50% of ZINC lives on Wynton/cluster 3. | |||
* The pipe to FAC is 100 Gbps. Assming we get 50% of that, allows 1 TB in 3 minutes, and 3 PB is 6 days. | |||
* thus, ftp/dock/delete. | * thus, ftp/dock/delete. | ||
* to get to corehpc | |||
ssh <user>@chpc-ucsf-bastion-vm1.corehpc.ucsf.edu | |||
* to get to slurm head node | |||
ssh chpc-ucsf-login-vm1 | |||
* disks are | |||
/mnt/scratch/user/<user>. | |||
/mnt/home/<user> | |||
/home/remote/<user> ; you land here when you login | |||
== Learn more == | |||
https://wiki.library.ucsf.edu/spaces/CHPC/pages/720396955/CoreHPC+Access+Primer | |||
https://it.ucsf.edu/service/corehpc | |||
https://wiki.library.ucsf.edu/spaces/CHPC/pages/736476672/CoreHPC+Submission+Examples | |||
https://wiki.library.ucsf.edu/spaces/CHPC/pages/751928275/CoreHPC+Technical+Overview | |||
Anyone who uses coreHPC, please take notes, update this and other pages, and teach the rest of the lab how to use it. Thank you. | |||
[[Category:Cluster]] | [[Category:Cluster]] | ||
Latest revision as of 19:06, 19 February 2026
We are still learning about FAC/coreHPC.
you will need to get separate (?) FAC and coreHPC accounts.
- FAC is for storage
- coreHPC is for compute
- it is more complicated than that, but it is a reasonable simplification.
- We collectively refer to FAC/coreHPC as "Cluster 8".
- We are attempting two strategies for cluster 8:
- upload ZINC on the fly, dock it, and then throw it away.
- nfs mount our cluster on coreHPC, data gets pulled as needed
- ZINC thus lives on our cluster (currently hosted on cluster 2, cross mounted read only to cluster 7).
- a copy of 50% of ZINC lives on Wynton/cluster 3.
- The pipe to FAC is 100 Gbps. Assming we get 50% of that, allows 1 TB in 3 minutes, and 3 PB is 6 days.
- thus, ftp/dock/delete.
- to get to corehpc
ssh <user>@chpc-ucsf-bastion-vm1.corehpc.ucsf.edu
- to get to slurm head node
ssh chpc-ucsf-login-vm1
- disks are
/mnt/scratch/user/<user>. /mnt/home/<user> /home/remote/<user> ; you land here when you login
Learn more
https://wiki.library.ucsf.edu/spaces/CHPC/pages/720396955/CoreHPC+Access+Primer https://it.ucsf.edu/service/corehpc https://wiki.library.ucsf.edu/spaces/CHPC/pages/736476672/CoreHPC+Submission+Examples https://wiki.library.ucsf.edu/spaces/CHPC/pages/751928275/CoreHPC+Technical+Overview
Anyone who uses coreHPC, please take notes, update this and other pages, and teach the rest of the lab how to use it. Thank you.