Tutorials: Difference between revisions
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* [[Using local Subversion Repository (SVN)]] | * [[Using local Subversion Repository (SVN)]] | ||
* [[Eplop]] | * [[Eplop]] | ||
* [[db2multipdb.py]] | * [[db2multipdb.py|db2multipdb.py How to decode .db files]] | ||
* [[Travel Depth]] | * [[Travel Depth|How to run Travel Depth analysis on the lab machines]] | ||
* [[pymol_background|How to make your PyMOL background transparent]] | * [[pymol_background|How to make your PyMOL background transparent]] | ||
* [[Chembl2pdb|How to link the protein targets in ChEMBL to their PDB structures]] | |||
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Revision as of 16:28, 22 October 2010
- How to run and analyze a DOCK run by hand
- SGE Cluster Docking
- MUD - Michael's Utilities for Docking
- Automated Database Preparation
- Understanding MakeDOCK, which automates sphere and grid generation
- How to use the QB3 cluster
- How to generate an HEI database
- How to hold a hit picking party
- How to compile DOCK
- Using local Subversion Repository (SVN)
- Eplop
- db2multipdb.py How to decode .db files
- How to run Travel Depth analysis on the lab machines
- How to make your PyMOL background transparent
- How to link the protein targets in ChEMBL to their PDB structures
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