CSD: Difference between revisions

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The Cambridge Structural Database contains crystallographic data on small organic molecules (much like the PDB).  
The Cambridge Structural Database contains crystallographic data on small organic molecules (much like the PDB).  


login to sgehead1 and run the following command:
login to sgehead1 and run the following command to correctly initialize your environment:


/raid3/software/csd/csd2011/bin/cq
    $ source /raid3/software/csd/current.csh


The license is in:
You can then run Conquest by executing the command:


/raid3/software/csd/csd2011/csd_licence.dat
    $ cq
 
This will be calling the file: /raid3/software/csd/current/bin/cq
 
In case you are prompted for a licence for any reason, it is located in
 
/raid3/software/csd/current/csd/csd_licence.dat
 
If this fails with the error Tcl Error about no display, you may have to login using:
 
ssh -Y sgehead
 
Which forwards your X session.
 
If you want help using ConQuest, try the documentation:
 
http://www.ccdc.cam.ac.uk/support/documentation/conquest/ConQuest/toc.html

Revision as of 22:45, 20 December 2011

The Cambridge Structural Database contains crystallographic data on small organic molecules (much like the PDB).

login to sgehead1 and run the following command to correctly initialize your environment:

   $ source /raid3/software/csd/current.csh

You can then run Conquest by executing the command:

    $ cq

This will be calling the file: /raid3/software/csd/current/bin/cq

In case you are prompted for a licence for any reason, it is located in

/raid3/software/csd/current/csd/csd_licence.dat

If this fails with the error Tcl Error about no display, you may have to login using:

ssh -Y sgehead

Which forwards your X session.

If you want help using ConQuest, try the documentation:

http://www.ccdc.cam.ac.uk/support/documentation/conquest/ConQuest/toc.html