Add Tools18 module: Difference between revisions
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=== Scripts === | === Scripts === | ||
=== Creating Template === | === Creating Template === | ||
This is recommend that you go though all the currently existing modules on [http://tools18.docking.org/start Tools18] and reuse instead of starting one from scratch. | |||
=== Add job type into psql table === | === Add job type into psql table === | ||
*Access the database | *Access the database |
Revision as of 23:46, 21 March 2019
Here is quick guide to add your script into Tools18 interface
Scripts
Creating Template
This is recommend that you go though all the currently existing modules on Tools18 and reuse instead of starting one from scratch.
Add job type into psql table
- Access the database
$ psql -h mem blaster blasteruser
- Look for the next available index on job_types table
blaster=> select * from job_types order by job_type_id; You will see table like this job_type_id | last_updated | short_name -------------+----------------------------+------------------- 1 | 2018-10-05 00:00:00 | analog 2 | 2018-10-05 00:00:00 | blaster 3 | 2018-10-05 00:00:00 | blasterpdb 4 | 2018-10-05 00:00:00 | build2d 5 | 2018-10-05 00:00:00 | build3d 6 | 2018-10-05 00:00:00 | cluster 7 | 2018-10-05 00:00:00 | covalent 8 | 2018-10-05 00:00:00 | dude 9 | 2018-10-05 00:00:00 | libanalysis 10 | 2018-10-05 00:00:00 | reaction 11 | 2018-10-05 00:00:00 | sea 12 | 2018-10-05 00:00:00 | threec 13 | 2018-10-05 00:00:00 | transform 14 | 2018-10-05 00:00:00 | zincbatch 15 | 2018-12-01 18:47:34 | cluster_molecules
- Insert new job type (Please be extra careful when doing this step)
This is important to start command with 'begin;' so that if any syntax mistakes could be undo. blaster=> begin; insert into job_types values(<next_available_id>, now(), '<your_job_name>'); Example: blaster=> begin; insert into job_types values(16, now(), 'shape');