Installing msms

installation notes for linux

Make a directory:

mkdir msms

go to the dir:

cd /your/path/msms

Get it from the web:

wget http://mgltools.scripps.edu/downloads/tars/releases/MSMSRELEASE/REL2.6.1/msms_i86_64Linux2_2.6.1.tar.gz

Unzip it:

tar -xzvf msms_i86_64Linux2_2.6.1.tar.gz

Make some symbolic links:

ln -s /your/path/msms/msms.x86_64Linux2.2.6.1.staticgcc msms

If you do not have nawk, make a link to awk.

ln -s `which awk` nawk

your done.

You might want to add it to your path.