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	<title>ABBBR - Revision history</title>
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	<updated>2026-04-08T20:14:26Z</updated>
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		<id>http://wiki.docking.org/index.php?title=ABBBR&amp;diff=14229&amp;oldid=prev</id>
		<title>Frodo: abc</title>
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		<updated>2022-05-21T17:21:10Z</updated>

		<summary type="html">&lt;p&gt;abc&lt;/p&gt;
&lt;p&gt;&lt;b&gt;New page&lt;/b&gt;&lt;/p&gt;&lt;div&gt;Like ABC (Analog-by-catalog) this is ABBBR (Analog by Building Block Reactions or AB3R. &lt;br /&gt;
&lt;br /&gt;
== Instructions from Jose ==&lt;br /&gt;
&lt;br /&gt;
code is at&lt;br /&gt;
 /nfs/home/jcastanon/Synt-On/&lt;br /&gt;
&lt;br /&gt;
The server can run on a screen, here are sample commands. Please submit absolute paths for input and output.&lt;br /&gt;
 $ screen -s new_synthons-3000&lt;br /&gt;
 $ source /nfs/soft2/anaconda3/bin/activate SynthI-env&lt;br /&gt;
 $ python SyntOn-server.py 3000 /mnt/nfs/exa/work/ak87/UCSF/SynthI/20220508-SynthI-ANALOGS/new_synthons.smi&lt;br /&gt;
The dictionary will load, then the screen can be detached. &lt;br /&gt;
&lt;br /&gt;
For the client, these are the commands:&lt;br /&gt;
&lt;br /&gt;
$ source /nfs/soft2/anaconda3/bin/activate SynthI-env&lt;br /&gt;
$ python SyntOn-client.py 3000 analog /mnt/nfs/exa/work/ak87/UCSF/SynthI/20220508-SynthI-ANALOGS/ligand.smi /nfs/home/jcastanon/output&lt;br /&gt;
&lt;br /&gt;
The server command is formatted like so:&lt;br /&gt;
python SyntOn-server.py $PORT $SYNTHONFILEPATH&lt;br /&gt;
&lt;br /&gt;
The client command: &lt;br /&gt;
python SyntOn-client.py $PORT $INPUT $OUTPATH&lt;br /&gt;
&lt;br /&gt;
Most of the arguments are hardcoded in the server. Let me know if you run into any issues, just a quick prototype for now. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Analogs]]&lt;/div&gt;</summary>
		<author><name>Frodo</name></author>
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