View source for Useful chimera commands


==Command line==

You might like to make a small molecules (eg. HEM) part of the surface of the protein instead of separate:

  surfcat one #1:1-290
  surf one probeRadius 1.4

You might want to color by partial charge:

  rangecolor charge,a min red 0 white max blue sel
  rangecolor charge,a -1.0 red 0.0 white 1.0 blue sel

This command will color the selected atoms by there charge.

Here are some tutorials:
*[[Chimera Tutorial (AMPC)]]
* Chimera Tutorial