ZINC scripts
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ZINC scripts.
download a list of molecules in mol2 format by zincid
#!/usr/bin/perl -w
# jji. July 2012 - read list of ZINC ids from stdin, output mol2 files, reference pH, as mol2
#
while (<STDIN>) {
my $a = $_; chop $a; print `wget -q -O - "http://zinc.docking.org/substance/reps/ref/$a.mol2"`;
}