ZINC15:Syntax: Difference between revisions

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* host = zinc15.docking.org
* '''host''' = zinc15.docking.org. during beta it is something else. ask us.
* resource is one of the 15 [[ZINC15:Resources]]
* '''resource''' is one of the 15 [[ZINC15:Resources]]. By far the most common are substances, catalogs and genes.
* format is one of the 12 [[ZINC15:Formats]].  If omitted, a web page is requested.
* '''format''' is one of the 12 [[ZINC15:Formats]].  If omitted, a web page is requested.
* columns is one or more of the [[ZINC15:Columns]]. Not all columns make sense in all resource contexts.  Examples are provided. There are sensible defaults for each resource, so the column specification may be omitted.
* '''columns''' is one or more of the [[ZINC15:Columns]]. Not all columns make sense in all resource contexts.  Examples are provided. There are sensible defaults for each resource, so the column specification may be omitted.
* variant is optionally one or more of the supported [[ZINC15:Variants]].
* '''variant''' is optionally one or more of the supported [[ZINC15:Variants]].
* [[ZINC15:Page Controls]] are optional, and are used to qualify how a search is to be performed and formatted for the page.
* [[ZINC15:Page Controls]] are optional, and are used to qualify how a search is to be performed and formatted for the page.
* [[ZINC15:Resource Constraints]] are optional, and may be qualified with [[ZINC15:Query operators]]
* [[ZINC15:Resource Constraints]] are optional, and may be qualified with [[ZINC15:Query operators]]

Revision as of 21:15, 4 March 2015

The general form of a ZINC 15 api request is

http[s]://host/resource[.format[:columns][/variant][?page-view-controls | resource-constraints]

Where items in [ square brackets ] are optional.

  • host = zinc15.docking.org. during beta it is something else. ask us.
  • resource is one of the 15 ZINC15:Resources. By far the most common are substances, catalogs and genes.
  • format is one of the 12 ZINC15:Formats. If omitted, a web page is requested.
  • columns is one or more of the ZINC15:Columns. Not all columns make sense in all resource contexts. Examples are provided. There are sensible defaults for each resource, so the column specification may be omitted.
  • variant is optionally one or more of the supported ZINC15:Variants.
  • ZINC15:Page Controls are optional, and are used to qualify how a search is to be performed and formatted for the page.
  • ZINC15:Resource Constraints are optional, and may be qualified with ZINC15:Query operators

The use of the Webapi is illustrated with numerous ZINC15:examples.


NP, Drug and BB

quality values Notes/Links
NP 0=unknown, 1=biogenic, 2=metabolite, 3=endogenous human metabolite lala
Drug 0=unknown, 1=annotated catalog, 2=bioactive, 4=bioactive in vitro < 1uM, 5=bioactive in cells <1uM, 6=in man, 8=world drug, 10=fda approved lala
BB f=not bb, t=bb asdf