ZINC15:Syntax: Difference between revisions
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* variant is optionally one or more of the supported [[ZINC15:Variants]]. | * variant is optionally one or more of the supported [[ZINC15:Variants]]. | ||
* page-view-controls is optionally one or more of those listed in the page-view-controls table, below. | * page-view-controls is optionally one or more of those listed in the page-view-controls table, below. | ||
* | * [[ZINC15:Resource Constraints]] are optional, and may be qualified with [[ZINC15:Query operators]] | ||
= NP, Drug and BB = | = NP, Drug and BB = | ||
Revision as of 21:04, 4 March 2015
The general form of a ZINC 15 api request is
http[s]://host/resource[.format[:columns][/variant][?page-view-controls | resource-constraints]
Where items in [ square brackets ] are optional.
- host = zinc15.docking.org
- resource is one of the 15 ZINC15:Resources
- format is one of the 12 ZINC15:Formats. If omitted, a web page is requested.
- columns is one or more of the ZINC15:Columns. Not all columns make sense in all resource contexts. Examples are provided. There are sensible defaults for each resource, so the column specification may be omitted.
- variant is optionally one or more of the supported ZINC15:Variants.
- page-view-controls is optionally one or more of those listed in the page-view-controls table, below.
- ZINC15:Resource Constraints are optional, and may be qualified with ZINC15:Query operators
NP, Drug and BB
| quality | values | Notes/Links |
|---|---|---|
| NP | 0=unknown, 1=biogenic, 2=metabolite, 3=endogenous human metabolite | lala |
| Drug | 0=unknown, 1=annotated catalog, 2=bioactive, 4=bioactive in vitro < 1uM, 5=bioactive in cells <1uM, 6=in man, 8=world drug, 10=fda approved | lala |
| BB | f=not bb, t=bb | asdf |
examples
http://zincapi.ucsf.bkslab.org/v1/substances/txt:smiles,zinc_id,tanimoto_similarity/catalog.purchasable%20gt%209&ecfp4.data%20similarto%20CC(=O)Oc1ccccc1C(=O)O%20within%20.5?count=all