Search results

Page title matches

• Target
  ...r which you seek new [[ligands]]. If an [[X-ray crystal structure]] of the target is available, that is often the preferred model for docking. However, struc
  483 bytes (71 words) - 03:53, 13 March 2014
• Target:CDK2
  18 bytes (2 words) - 20:33, 8 October 2012
• Target based
  ...et-derived pharmacophore methods. There are likely to be other methods, as target crystal structures can be used in many ways.
  224 bytes (33 words) - 20:33, 8 October 2012
• Orphan target
  An orphan target is a target for which the endogenous metabolite and physiological function is unknown.
  125 bytes (18 words) - 17:15, 11 March 2014
• Protein target
  #REDIRECT [[Target]]
  20 bytes (2 words) - 03:53, 13 March 2014
• Protein Target Preparation
  Protein Target Preparation
  2 KB (264 words) - 16:57, 28 August 2019
• Protein Target Preparation Updated
  16 KB (2,467 words) - 18:59, 10 October 2019
• Features of your target structure
  Depending on the structural features of the target model, you may need to take special steps to prepare for docking. Many of t ...may well be preferable to use the non-covalently bound ligand form of the target.
  2 KB (310 words) - 20:24, 8 October 2012
• B. Comparing the interactions of different ligands with the same target
  3 KB (561 words) - 09:56, 13 March 2014
• DOCK Blaster:Dock PDB target
  989 bytes (164 words) - 20:02, 8 October 2012

Page text matches

• Target based
  ...et-derived pharmacophore methods. There are likely to be other methods, as target crystal structures can be used in many ways.
  224 bytes (33 words) - 20:33, 8 October 2012
• Orphan target
  An orphan target is a target for which the endogenous metabolite and physiological function is unknown.
  125 bytes (18 words) - 17:15, 11 March 2014
• Heatmap tool
  /nfs/work/teague/Projects/heatmaps/bin-target-actives.py * python bin-target-actives.py OPRD1 -o OPRD1.counts # write 2D matrix of counts to file
  613 bytes (86 words) - 20:44, 3 May 2016
• ZINC15:videos
  * [[Target target]] * [[Ligands for my target]]
  696 bytes (79 words) - 00:08, 2 October 2015
• CDK2
  This is the target page for CDK2. This is an important target.
  402 bytes (64 words) - 18:10, 8 October 2012
• Protein target
  #REDIRECT [[Target]]
  20 bytes (2 words) - 03:53, 13 March 2014
• Getting Started
  Docking requires a structure of the target to dock to. == Target structure NOT available ==
  2 KB (306 words) - 06:37, 13 March 2014
• Features of your crystal structure
  #REDIRECT [[Features of your target structure]]
  47 bytes (6 words) - 20:24, 8 October 2012
• Sphere Selector
  ...spheres with a user-defined radius of a target molecule (see sphgen). The target molecule can be anything (ie known ligand, receptor residue, etc) as long a
  514 bytes (82 words) - 04:26, 14 February 2014
• Psicquic channels
  = Target-Target Channels (tt) = = Target-Compound Channels (ct) =
  1 KB (152 words) - 23:31, 30 January 2018
• Pharmacophore-based methods
  Pharmacophore methods include both [[target based]] and [[ligand based]] methods for ligand discovery. = Target based pharmacophore methods =
  901 bytes (127 words) - 20:31, 8 October 2012
• Target
  ...r which you seek new [[ligands]]. If an [[X-ray crystal structure]] of the target is available, that is often the preferred model for docking. However, struc
  483 bytes (71 words) - 03:53, 13 March 2014
• DOCK Blaster job example
  * Target name: [[Target:target_name target_name]]
  569 bytes (67 words) - 20:02, 8 October 2012
• ZINC15 todo
  * target class list and target class detail pages (TS) * target list and target detail pages (TS)
  2 KB (331 words) - 00:00, 29 July 2015
• Quick Search Bar
  = Target = ...well as target names are supported. To force this behavior, prefix with target:
  2 KB (273 words) - 04:11, 14 February 2014
• Tool1
  * Specify first target * Specify second target
  601 bytes (92 words) - 05:05, 14 February 2014
• Beta Secretase
  Beta secretase is an important target.
  83 bytes (11 words) - 18:10, 8 October 2012
• Nailgun
  ...er/target/classes:/nfs/home/stefan/NAILGUN/nailgun-master/nailgun-examples/target/classes:/nfs/soft/jchem/jchem-19.15/lib/*" ./nailgun-client/target/ng com.facebook.nailgun.examples.HelloWorld
  2 KB (300 words) - 20:52, 18 March 2020
• ZINC Novelty Score
  ...velty of the compound with respect to known (annotated) compounds for that target. ...compound with respect to known (annotated) compounds matching a particular target pattern.
  2 KB (264 words) - 04:20, 1 October 2015
• Scaffold hopping
  ...ctives, that have a good chance of being active themselves. In contract, [[target based]] methods such as docking tend to produce a much lower rate of active ...n ligand discovery projects use some combination of [[ligand based]] and [[target based]] techniques.
  823 bytes (126 words) - 20:32, 8 October 2012