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• DOCK 3.6 User Manual
  ...from 1994: [http://wiki.bkslab.org/images/4/4e/Dock3_5refman.pdf DOCK 3.5 Manual] {LINK NO LONGER WORKING}
  7 KB (721 words) - 22:17, 2 January 2019
• Manual Specification of Non-Rotatable Bonds
  1 KB (209 words) - 18:01, 15 February 2014

Page text matches

• DOCK Blaster:Other Input Options
  [[Category:Manual]]
  87 bytes (12 words) - 20:02, 8 October 2012
• DOCK Blaster:Prepare Ligand
  [[Category:Manual]]
  92 bytes (10 words) - 20:02, 8 October 2012
• Are critical points/spheres supported in my version of DOCK?
  Try using automated matching if manual matching seems not to work For more information on labeling spheres, go to the DOCK 6 manual on our web site at dock.compbio.ucsf.edu under Sphgen >> Output.
  656 bytes (106 words) - 00:29, 11 January 2019
• ZINC20
  Point to PDF of the Performance section of the Arthor 3.2 manual.
  116 bytes (17 words) - 22:26, 12 June 2020
• DOCK Blaster:Other Options
  [[Category:Manual]]
  164 bytes (26 words) - 20:02, 8 October 2012
• DOCK Blaster:Results
  [[Category:Manual]]
  69 bytes (8 words) - 20:02, 8 October 2012
• DOCK on cygwin
  The installation section of the DOCK manual specifies details on compiling DOCK, which might be helpful: ...pbio.ucsf.edu/DOCK_6/dock6_manual.htm#Installation Installation section of Manual]
  1 KB (197 words) - 23:38, 22 July 2014
• DOCK 4
  * Original Manual as PDF [[Image:Dock40.pdf]]
  303 bytes (46 words) - 23:21, 10 January 2019
• What Can Dock Do
  [[Category:Manual]]
  602 bytes (79 words) - 20:33, 8 October 2012
• Create decoy tables
  === Old Manual Migration Method (In Case of Errors): ===
  3 KB (437 words) - 05:18, 4 March 2015
• DOCK 6
  * Manual as a single PDF. [[Image:Dock61.pdf]] = Manual =
  2 KB (343 words) - 22:22, 10 January 2019
• Identification of Flexible Layers
  ...gment is selected from the rigid segments in an automatic fashion (see see Manual Specification of Non-rotatable Bonds to override this behavior). The molecu
  1 KB (166 words) - 09:55, 13 March 2014
• Parameter Parser
  [[Category:Manual]]
  1 KB (168 words) - 04:05, 14 February 2014
• DOCK Blaster:History
  * 1982-1993: DOCK Blaster draws heavily upon the manual docking protocol developed in [[Tack Kuntz]]'s lab. * 1989-2000 Further refinements of the manual protocol in [[Brian Shoichet]]'s lab.
  3 KB (381 words) - 20:02, 8 October 2012
• Preparing the ligand
  ==Manual way==
  5 KB (747 words) - 00:26, 17 January 2013
• Output
  [[Category:Manual]]
  1 KB (168 words) - 04:01, 14 February 2014
• Interacting with Chemaxon dataset
  [[Category:Manual]]
  1 KB (158 words) - 18:05, 15 February 2014
• Docking Analysis in DOCK3.8
  == Manual Install ==
  5 KB (837 words) - 04:34, 3 March 2023
• Ligand desolvation
  ...please see the [http://dock.compbio.ucsf.edu/DOCK_6/dock6_manual.htm DOCK6 manual].
  1 KB (227 words) - 05:34, 14 February 2014
• Identification of rigid segments
  ...nput molecule. Additional bonds may be specified as rigid by the user (see Manual Specification of Non-rotatable Bonds).
  2 KB (239 words) - 20:27, 8 October 2012