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- ...from 1994: [http://wiki.bkslab.org/images/4/4e/Dock3_5refman.pdf DOCK 3.5 Manual] {LINK NO LONGER WORKING}7 KB (721 words) - 22:17, 2 January 2019
- 1 KB (209 words) - 18:01, 15 February 2014
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- [[Category:Manual]]87 bytes (12 words) - 20:02, 8 October 2012
- [[Category:Manual]]92 bytes (10 words) - 20:02, 8 October 2012
- Try using automated matching if manual matching seems not to work For more information on labeling spheres, go to the DOCK 6 manual on our web site at dock.compbio.ucsf.edu under Sphgen >> Output.656 bytes (106 words) - 00:29, 11 January 2019
- Point to PDF of the Performance section of the Arthor 3.2 manual.116 bytes (17 words) - 22:26, 12 June 2020
- [[Category:Manual]]164 bytes (26 words) - 20:02, 8 October 2012
- [[Category:Manual]]69 bytes (8 words) - 20:02, 8 October 2012
- The installation section of the DOCK manual specifies details on compiling DOCK, which might be helpful: ...pbio.ucsf.edu/DOCK_6/dock6_manual.htm#Installation Installation section of Manual]1 KB (197 words) - 23:38, 22 July 2014
- * Original Manual as PDF [[Image:Dock40.pdf]]303 bytes (46 words) - 23:21, 10 January 2019
- [[Category:Manual]]602 bytes (79 words) - 20:33, 8 October 2012
- === Old Manual Migration Method (In Case of Errors): ===3 KB (437 words) - 05:18, 4 March 2015
- * Manual as a single PDF. [[Image:Dock61.pdf]] = Manual =2 KB (343 words) - 22:22, 10 January 2019
- ...gment is selected from the rigid segments in an automatic fashion (see see Manual Specification of Non-rotatable Bonds to override this behavior). The molecu1 KB (166 words) - 09:55, 13 March 2014
- [[Category:Manual]]1 KB (168 words) - 04:05, 14 February 2014
- * 1982-1993: DOCK Blaster draws heavily upon the manual docking protocol developed in [[Tack Kuntz]]'s lab. * 1989-2000 Further refinements of the manual protocol in [[Brian Shoichet]]'s lab.3 KB (381 words) - 20:02, 8 October 2012
- ==Manual way==5 KB (747 words) - 00:26, 17 January 2013
- [[Category:Manual]]1 KB (168 words) - 04:01, 14 February 2014
- [[Category:Manual]]1 KB (158 words) - 18:05, 15 February 2014
- == Manual Install ==5 KB (837 words) - 04:34, 3 March 2023
- ...please see the [http://dock.compbio.ucsf.edu/DOCK_6/dock6_manual.htm DOCK6 manual].1 KB (227 words) - 05:34, 14 February 2014
- ...nput molecule. Additional bonds may be specified as rigid by the user (see Manual Specification of Non-rotatable Bonds).2 KB (239 words) - 20:27, 8 October 2012
- ...please see the [http://dock.compbio.ucsf.edu/DOCK_6/dock6_manual.htm DOCK6 manual].2 KB (248 words) - 04:20, 13 March 2014
- === Manual way to modify colored matching spheres ===8 KB (878 words) - 20:37, 12 April 2022
- [[Category:Manual]]2 KB (294 words) - 15:10, 25 March 2014
- (2) Manual Matching —Specify the distance and node parameters, and DOCK will generat2 KB (283 words) - 04:25, 14 February 2014
- ...from 1994: [http://wiki.bkslab.org/images/4/4e/Dock3_5refman.pdf DOCK 3.5 Manual] {LINK NO LONGER WORKING}7 KB (721 words) - 22:17, 2 January 2019
- # Flag to perform automated matching instead of manual matching3 KB (357 words) - 18:05, 15 February 2014
- ...CK Blaster pipeline. However there are some things that may still require manual intervention.2 KB (395 words) - 12:42, 14 March 2014
- [[Category:Manual]]3 KB (365 words) - 05:24, 13 March 2014
- (2) Manual Matching —Specify the distance and node ...ng [yes] (yes, no):<br> # Flag to perform automated matching instead of manual matching6 KB (996 words) - 23:44, 23 March 2016
- *[[DOCK 3.6 User Manual]]2 KB (326 words) - 22:15, 2 January 2019
- Users manual - [http://pymol.sourceforge.net/newman/user/toc.html] or type ''help keywor2 KB (435 words) - 20:25, 8 October 2012
- [[Category:Manual]]3 KB (389 words) - 04:08, 14 February 2014
- [[Category:Manual]]1 KB (209 words) - 03:51, 13 March 2014
- * process the results (interaction fingerprint, strain filter, clustering, manual review)3 KB (413 words) - 17:06, 8 April 2023
- ...res are supported in all versions of DOCK. Try using automated matching if manual matching seems not to work For more information on labeling spheres, go to the DOCK 6 manual on our web site at dock.compbio.ucsf.edu under Sphgen >> Output.7 KB (1,087 words) - 00:29, 11 January 2019
- | [[:Category:Manual | manuals, as they are ]] || [[:Category:Topic | Topics ]] || [[Special:C4 KB (487 words) - 20:36, 7 May 2024
- According to the [https://www.mediawiki.org/wiki/Manual:Moving_a_wiki media wiki guide], the safest way to migrate is by using the ...guide on how to install autosqlbackup on Centos and how to do an automatic/manual backup]3 KB (537 words) - 21:28, 18 October 2022
- * unresolvable problems. the job cannot start without manual changes by you to the input files.3 KB (509 words) - 20:02, 8 October 2012
- # Time investments. Manual search in the databases takes quite some time, especially if you need to fi3 KB (538 words) - 06:41, 21 September 2023
- ...We are using the names "SlurmDynamicGroup" and "SlurmAutoScaling" (use the manual editor):4 KB (508 words) - 20:24, 22 March 2023
- * This is often a manual step, by email, or download.3 KB (408 words) - 23:23, 4 January 2019
- [[Category:Manual]]4 KB (557 words) - 04:10, 14 February 2014
- ...ving an example of experimental low-resolution electron density maps and a manual model building into those maps (DNA-dependent Protein Kinase catalytic subu4 KB (549 words) - 20:17, 8 October 2012
- [[Category:Manual]]3 KB (392 words) - 04:33, 25 February 2014
- ...idiosyncrasies in the MPI installation. One corrective approach is to use manual linking; add to the LIBS definition in config.h the link flags (-L and -l)4 KB (607 words) - 01:28, 2 September 2020
- [[Category:Manual]]4 KB (686 words) - 20:02, 8 October 2012
- ...orld Documentation is found in Section 6.3 of the SmallWorld version 5.6.2 manual.6 KB (917 words) - 02:14, 23 January 2024
- ...com/downloads/arthor/documentation/Arthor.pdf Here is the link to Arthor's manual] #* Add these lines in the file. Check the manual for more options.16 KB (2,279 words) - 18:01, 2 May 2024
- [[Category:Manual]]5 KB (622 words) - 23:49, 10 November 2017
- ...parameters correspond to torsion driving parameters described in the omega manual: https://docs.eyesopen.com/applications/omega/omega/omega_opt_params.html#t ...to know more about how these parameters function, cross reference with the manual page.10 KB (1,616 words) - 18:11, 9 March 2023
- Check also the Plop manual on the Jacobson Wiki: http://wiki.jacobsonlab.org/index.php/Plop_manual <br5 KB (825 words) - 12:37, 21 March 2014
- (see [[Manual Specification of Non-rotatable Bonds]]). =Manual Specification of Non-rotatable Bonds=18 KB (2,718 words) - 23:58, 23 March 2016
- [[Category:Manual]]10 KB (895 words) - 16:09, 25 March 2014
- [[Category:Manual]]7 KB (1,196 words) - 12:37, 21 March 2014
- ...provide the participants hands-on training in the fast and easy method of manual streak seeding. Seeding can also be implemented with a robot, for example w6 KB (874 words) - 20:17, 8 October 2012
- One corrective approach is to use manual linking;8 KB (1,195 words) - 19:52, 10 January 2019
- ...Use 0.0329 if you ran your simulation with TIP3P waters. Consult the Amber manual The following constants were obtained from the amber manual:26 KB (4,023 words) - 00:21, 5 March 2019
- ...s/smallworld/documentation/SmallWorld.pdf Here is the link to Smallworld's manual]12 KB (1,637 words) - 23:38, 1 May 2024
- Option 2: Manual Partitioning11 KB (1,504 words) - 03:03, 8 July 2022
- The funky names help to make our manual intervention explicit and transparent.12 KB (1,955 words) - 20:35, 4 January 2019
- ...hierarchy information, the van der Waals type as described in the Dock 3.5 manual is listed. Next the partial atomic charge multiplied by 10000. This is hi16 KB (2,235 words) - 17:59, 21 October 2012