User contributions for TBalius
Jump to navigation
Jump to search
15 April 2015
- 21:0421:04, 15 April 2015 diff hist +1,212 DOCK 3.7 2015/04/15 abl1 Tutorial →set up a directory
- 20:4020:40, 15 April 2015 diff hist +213 N DOCK 3.7 2015/04/15 abl1 Tutorial Created page with " This tutoral use the 3.7.2 beta version of dock release on XXX. == set up a directory == == download enrichment databases == == run be_blasti.py== == run blastermaster.py..."
- 20:3620:36, 15 April 2015 diff hist +40 DOCK 3.7 No edit summary
19 March 2015
6 March 2015
- 17:0917:09, 6 March 2015 diff hist +223 How to compile DOCK No edit summary
5 March 2015
- 19:5319:53, 5 March 2015 diff hist −5 How to compile DOCK →debuging dock
- 19:5219:52, 5 March 2015 diff hist +663 How to compile DOCK No edit summary
- 19:3619:36, 5 March 2015 diff hist +1 Install DOCK 3.7 No edit summary
23 October 2014
- 15:4615:46, 23 October 2014 diff hist +87 Mol2db2 No edit summary current
- 15:4515:45, 23 October 2014 diff hist +58 DOCK 3.7 No edit summary
- 15:4415:44, 23 October 2014 diff hist +293 Mol2db2 Format 2 No edit summary current
26 September 2014
- 17:4517:45, 26 September 2014 diff hist +65 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 17:4117:41, 26 September 2014 diff hist +52 N File:Veiwdock.FXa.frag.top200.png chimera veiwdock session for FXa with top 200 frags. current
- 17:3817:38, 26 September 2014 diff hist +64 DOCK 3.7 2014/09/25 FXa Tutorial →pose visualization
- 13:0613:06, 26 September 2014 diff hist +15 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 13:0513:05, 26 September 2014 diff hist +3 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the GIST development version of DOCK
- 13:0513:05, 26 September 2014 diff hist +135 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the GIST development version of DOCK
- 12:5612:56, 26 September 2014 diff hist +62 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 12:5512:55, 26 September 2014 diff hist +377 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 12:4912:49, 26 September 2014 diff hist +348 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:4312:43, 26 September 2014 diff hist +2,005 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:3512:35, 26 September 2014 diff hist +18 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:3212:32, 26 September 2014 diff hist −1 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:3112:31, 26 September 2014 diff hist −55 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:2912:29, 26 September 2014 diff hist +12 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the release version of DOCK3.7-beta.1.0.1.
- 12:2712:27, 26 September 2014 diff hist +5 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:2612:26, 26 September 2014 diff hist −3 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:2512:25, 26 September 2014 diff hist +2,405 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:0912:09, 26 September 2014 diff hist +292 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 12:0612:06, 26 September 2014 diff hist +1,111 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the release version of DOCK3.7-beta.1.0.1.
- 11:5111:51, 26 September 2014 diff hist +7 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 11:5111:51, 26 September 2014 diff hist +739 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 00:3100:31, 26 September 2014 diff hist +41 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the release version of DOCK3.7-beta.1.0.1.
25 September 2014
- 23:3223:32, 25 September 2014 diff hist +2 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 23:2923:29, 25 September 2014 diff hist +218 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 23:2323:23, 25 September 2014 diff hist +45 N File:Lowdiele.png This the low dielectric sphere for Factor Xa. current
- 23:2223:22, 25 September 2014 diff hist +21 N File:Match.png FXa matching spheres. current
- 23:2123:21, 25 September 2014 diff hist +36 N File:Sphgenall.png FXa with sphgen all sphere clusters. current
- 23:2023:20, 25 September 2014 diff hist +127 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 22:0722:07, 25 September 2014 diff hist +107 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the GIST development version of DOCK
- 21:5921:59, 25 September 2014 diff hist −3 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 21:5821:58, 25 September 2014 diff hist +98 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 21:2621:26, 25 September 2014 diff hist +10 Installing msms No edit summary
- 21:2521:25, 25 September 2014 diff hist −9 Installing msms No edit summary
- 21:2421:24, 25 September 2014 diff hist +493 N Installing msms Created page with "## installation notes. Make a directory: mkdir msms go to the dir: cd /your/path/msms Get it from the web: wget http://mgltools.scripps.edu/downloads/tars/releases/MSMSREL..."
- 21:1621:16, 25 September 2014 diff hist +64 Install DOCK 3.7 No edit summary
- 20:5420:54, 25 September 2014 diff hist +143 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the release version of DOCK3.7-beta.1.0.1.
- 19:2019:20, 25 September 2014 diff hist +2 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the release version of DOCK3.7-beta.1.0.1.
- 19:2019:20, 25 September 2014 diff hist +356 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 18:4718:47, 25 September 2014 diff hist +19 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 18:4718:47, 25 September 2014 diff hist +19 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 18:3518:35, 25 September 2014 diff hist +874 N DOCK 3.7 2014/09/25 FXa Tutorial Created page with " Written by Trent E Balius and Crystal Nguyen on 2014/09/25 == This part of the tutorial uses the release version of DOCK3.7-beta.1.0.1. == see the following for requirement..."
- 17:1817:18, 25 September 2014 diff hist +39 DOCK 3.7 No edit summary
21 September 2014
- 22:2922:29, 21 September 2014 diff hist +237 Install DOCK 3.7 No edit summary
13 September 2014
- 22:5722:57, 13 September 2014 diff hist +161 Install DOCK 3.7 No edit summary
- 22:4822:48, 13 September 2014 diff hist +110 Install DOCK 3.7 No edit summary
- 22:4422:44, 13 September 2014 diff hist +61 Install DOCK 3.7 No edit summary
- 22:4122:41, 13 September 2014 diff hist +218 Install DOCK 3.7 No edit summary
27 August 2014
- 18:5018:50, 27 August 2014 diff hist +9 Github →Fork for Development current
- 18:3418:34, 27 August 2014 diff hist +102 Github No edit summary
- 18:2018:20, 27 August 2014 diff hist +206 Github →Set up for ssh access
24 July 2014
- 18:5318:53, 24 July 2014 diff hist −4 Github No edit summary
22 July 2014
- 23:3823:38, 22 July 2014 diff hist 0 DOCK on cygwin No edit summary current
- 23:3723:37, 22 July 2014 diff hist 0 DOCK on cygwin No edit summary
- 23:3723:37, 22 July 2014 diff hist −1 DOCK on cygwin No edit summary
- 23:3423:34, 22 July 2014 diff hist −1 DOCK on cygwin No edit summary
- 23:3323:33, 22 July 2014 diff hist +62 DOCK on cygwin No edit summary
- 23:3223:32, 22 July 2014 diff hist +207 DOCK on cygwin No edit summary
6 June 2014
- 21:0821:08, 6 June 2014 diff hist +159 Copying files No edit summary
- 20:5420:54, 6 June 2014 diff hist +28 Disk types No edit summary
- 20:4520:45, 6 June 2014 diff hist +2 Automated Database Preparation →Automatic Decoy Generation
- 20:4520:45, 6 June 2014 diff hist +183 Automated Database Preparation →Automatic Decoy Generation
14 March 2014
- 12:4212:42, 14 March 2014 diff hist 0 BKS lab Structure preparation →Preparing cofactors or nonstandard residue for receptor current
- 12:4112:41, 14 March 2014 diff hist −6 BKS lab Structure preparation No edit summary
8 November 2013
- 16:3916:39, 8 November 2013 diff hist +657 Automated Database Preparation →Automatic Decoy Generation
28 October 2013
8 October 2013
- 20:4920:49, 8 October 2013 diff hist +154 DOCK 3.7 No edit summary
- 20:4520:45, 8 October 2013 diff hist +14 DOCK 3 No edit summary
- 20:4520:45, 8 October 2013 diff hist +53 DOCK 3 →History
9 September 2013
- 14:4914:49, 9 September 2013 diff hist +2 DOCK Overview →(A) Sphere Centers
- 14:4614:46, 9 September 2013 diff hist +21 DOCK Overview No edit summary
5 September 2013
- 21:3621:36, 5 September 2013 diff hist +4 Disk types No edit summary
- 21:3221:32, 5 September 2013 diff hist −40 Disk types No edit summary
- 21:3121:31, 5 September 2013 diff hist +19 Disk types →scratch
- 21:2321:23, 5 September 2013 diff hist +1 Disk types →scratch
- 21:2221:22, 5 September 2013 diff hist +681 Disk types No edit summary
6 August 2013
- 15:3115:31, 6 August 2013 diff hist +39 Cluster 4 No edit summary
- 15:2915:29, 6 August 2013 diff hist +696 Cluster 4 No edit summary
- 15:1715:17, 6 August 2013 diff hist 0 Cluster 4 No edit summary
- 15:1615:16, 6 August 2013 diff hist +663 Cluster 4 No edit summary
- 14:5814:58, 6 August 2013 diff hist +2 Cluster 4 No edit summary
- 14:5814:58, 6 August 2013 diff hist +171 N Cluster 4 Created page with "This instructions are intended for Shoichet lab members. (1) Register with the Compute Canada Database (CCDB): (1.1) go to the following page and click Register (1.2)"
- 14:3314:33, 6 August 2013 diff hist +2 About our cluster No edit summary
- 14:3314:33, 6 August 2013 diff hist +67 About our cluster No edit summary
24 July 2013
- 16:0516:05, 24 July 2013 diff hist +19 Disk types No edit summary
- 15:0415:04, 24 July 2013 diff hist +80 Using local Subversion Repository (SVN) No edit summary
23 January 2013
- 22:3422:34, 23 January 2013 diff hist +3 BKS lab Structure preparation No edit summary
- 22:3422:34, 23 January 2013 diff hist +123 BKS lab Structure preparation No edit summary
22 January 2013
- 19:2419:24, 22 January 2013 diff hist −2 BKS lab Structure preparation →Preparing cofactors or nonstandard residue for receptor
- 19:2119:21, 22 January 2013 diff hist +207 BKS lab Structure preparation No edit summary