User contributions for TBalius
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23 April 2015
- 23:5623:56, 23 April 2015 diff hist +1 DOCK 3.7 tart No edit summary
- 17:5017:50, 23 April 2015 diff hist 0 DOCK 3.7 2015/04/15 abl1 Tutorial →make the hing regen more polar
- 00:1600:16, 23 April 2015 diff hist +69 DOCK 3.7 2015/04/15 abl1 Tutorial No edit summary
19 April 2015
- 16:5916:59, 19 April 2015 diff hist +11 DOCK 3.7 2015/04/15 abl1 Tutorial No edit summary
- 14:1314:13, 19 April 2015 diff hist +149 DOCK 3.7 2015/04/15 abl1 Tutorial No edit summary
18 April 2015
- 00:3500:35, 18 April 2015 diff hist +3,934 DOCK 3.7 2015/04/15 abl1 Tutorial →improving docking
- 00:2400:24, 18 April 2015 diff hist 0 N File:Modspheres.png No edit summary current
- 00:2400:24, 18 April 2015 diff hist +305 DOCK 3.7 2015/04/15 abl1 Tutorial No edit summary
- 00:1700:17, 18 April 2015 diff hist +73 DOCK 3.7 2015/04/15 abl1 Tutorial →combine scores and poses
- 00:1600:16, 18 April 2015 diff hist 0 N File:Decoydock.png No edit summary current
- 00:1500:15, 18 April 2015 diff hist 0 N File:Liganddock.png No edit summary current
- 00:1400:14, 18 April 2015 diff hist −1 DOCK 3.7 2015/04/15 abl1 Tutorial →create AUC plot of ligands and decoys
17 April 2015
- 21:0621:06, 17 April 2015 diff hist +7 DOCK 3.7 2015/04/15 abl1 Tutorial →run blastermaster.py
- 21:0621:06, 17 April 2015 diff hist +187 DOCK 3.7 2015/04/15 abl1 Tutorial →combine scores and poses
- 20:4720:47, 17 April 2015 diff hist +414 DOCK 3.7 2015/04/15 abl1 Tutorial →create AUC plot of ligands and decoys
- 20:4420:44, 17 April 2015 diff hist 0 N File:AblROCplot.png No edit summary current
- 20:4420:44, 17 April 2015 diff hist +166 DOCK 3.7 2015/04/15 abl1 Tutorial →create AUC plot of ligands and decoys
- 20:4120:41, 17 April 2015 diff hist 0 N File:Spheresbox.png No edit summary current
- 20:4020:40, 17 April 2015 diff hist +255 DOCK 3.7 2015/04/15 abl1 Tutorial →visualize the docking spheres
- 20:3620:36, 17 April 2015 diff hist +22 DOCK 3.7 2015/04/15 abl1 Tutorial →visualize the docking spheres
- 20:3620:36, 17 April 2015 diff hist −2 DOCK 3.7 2015/04/15 abl1 Tutorial →visualize the docking spheres
- 20:3420:34, 17 April 2015 diff hist +94 DOCK 3.7 2015/04/15 abl1 Tutorial →visualize the docking spheres
- 20:3120:31, 17 April 2015 diff hist −2 DOCK 3.7 2015/04/15 abl1 Tutorial →visualize the docking spheres
- 20:2720:27, 17 April 2015 diff hist +3,924 DOCK 3.7 2015/04/15 abl1 Tutorial No edit summary
- 20:2020:20, 17 April 2015 diff hist +2,575 DOCK 3.7 2015/04/15 abl1 Tutorial No edit summary
- 20:1020:10, 17 April 2015 diff hist −9 DOCK 3.7 2015/04/15 abl1 Tutorial →run enrichment calucaltions
- 20:0920:09, 17 April 2015 diff hist −98 DOCK 3.7 2015/04/15 abl1 Tutorial →visualize the docking spheres
- 20:0720:07, 17 April 2015 diff hist 0 File:Spheres.png TBalius uploaded a new version of "File:Spheres.png" current
- 20:0620:06, 17 April 2015 diff hist 0 N File:Spheres.png No edit summary
- 20:0420:04, 17 April 2015 diff hist +9 DOCK 3.7 2015/04/15 abl1 Tutorial →visualize the docking spheres
- 20:0320:03, 17 April 2015 diff hist −16 DOCK 3.7 2015/04/15 abl1 Tutorial →visualize the docking spheres
- 20:0320:03, 17 April 2015 diff hist +105 DOCK 3.7 2015/04/15 abl1 Tutorial →visualize the docking spheres
- 20:0220:02, 17 April 2015 diff hist +38 DOCK 3.7 2015/04/15 abl1 Tutorial →visualize the docking spheres
- 20:0020:00, 17 April 2015 diff hist +156 DOCK 3.7 2015/04/15 abl1 Tutorial →run blastermaster.py
15 April 2015
- 22:4022:40, 15 April 2015 diff hist −12 DOCK 3.7 2015/04/15 abl1 Tutorial No edit summary
- 22:1722:17, 15 April 2015 diff hist +6 DOCK 3.7 2015/04/15 abl1 Tutorial No edit summary
- 22:0222:02, 15 April 2015 diff hist +275 DOCK 3.7 2015/04/15 abl1 Tutorial →run blastermaster.py
- 21:4621:46, 15 April 2015 diff hist −3,782 DOCK 3.7 2015/04/15 abl1 Tutorial No edit summary
- 21:4321:43, 15 April 2015 diff hist +5,528 DOCK 3.7 2015/04/15 abl1 Tutorial No edit summary
- 21:4121:41, 15 April 2015 diff hist +3,686 DOCK 3.7 2015/04/15 abl1 Tutorial →run blastermaster.py
- 21:3521:35, 15 April 2015 diff hist 0 N File:Rec lig 2HYY.png No edit summary current
- 21:3221:32, 15 April 2015 diff hist +420 DOCK 3.7 2015/04/15 abl1 Tutorial →run be_blasti.py
- 21:2521:25, 15 April 2015 diff hist +416 N Get msms Created page with " see the following website for information: [http://mgltools.scripps.edu/packages/MSMS/ msms page] ==Installing MSMS == wget http://mgltools.scripps.edu/downloads/tars/rel..."
- 21:2121:21, 15 April 2015 diff hist +2,479 DOCK 3.7 2015/04/15 abl1 Tutorial →run be_blasti.py
- 21:1121:11, 15 April 2015 diff hist −37 DOCK 3.7 2015/04/15 abl1 Tutorial No edit summary
- 21:1021:10, 15 April 2015 diff hist +101 DOCK 3.7 2015/04/15 abl1 Tutorial No edit summary
- 21:0921:09, 15 April 2015 diff hist +116 DOCK 3.7 2015/04/15 abl1 Tutorial →set up directories and get databases
- 21:0521:05, 15 April 2015 diff hist +18 DOCK 3.7 2015/04/15 abl1 Tutorial No edit summary
- 21:0421:04, 15 April 2015 diff hist +1,212 DOCK 3.7 2015/04/15 abl1 Tutorial →set up a directory
- 20:4020:40, 15 April 2015 diff hist +213 N DOCK 3.7 2015/04/15 abl1 Tutorial Created page with " This tutoral use the 3.7.2 beta version of dock release on XXX. == set up a directory == == download enrichment databases == == run be_blasti.py== == run blastermaster.py..."
- 20:3620:36, 15 April 2015 diff hist +40 DOCK 3.7 No edit summary
19 March 2015
6 March 2015
- 17:0917:09, 6 March 2015 diff hist +223 How to compile DOCK No edit summary
5 March 2015
- 19:5319:53, 5 March 2015 diff hist −5 How to compile DOCK →debuging dock
- 19:5219:52, 5 March 2015 diff hist +663 How to compile DOCK No edit summary
- 19:3619:36, 5 March 2015 diff hist +1 Install DOCK 3.7 No edit summary
23 October 2014
- 15:4615:46, 23 October 2014 diff hist +87 Mol2db2 No edit summary current
- 15:4515:45, 23 October 2014 diff hist +58 DOCK 3.7 No edit summary
- 15:4415:44, 23 October 2014 diff hist +293 Mol2db2 Format 2 No edit summary current
26 September 2014
- 17:4517:45, 26 September 2014 diff hist +65 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 17:4117:41, 26 September 2014 diff hist +52 N File:Veiwdock.FXa.frag.top200.png chimera veiwdock session for FXa with top 200 frags. current
- 17:3817:38, 26 September 2014 diff hist +64 DOCK 3.7 2014/09/25 FXa Tutorial →pose visualization
- 13:0613:06, 26 September 2014 diff hist +15 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 13:0513:05, 26 September 2014 diff hist +3 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the GIST development version of DOCK
- 13:0513:05, 26 September 2014 diff hist +135 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the GIST development version of DOCK
- 12:5612:56, 26 September 2014 diff hist +62 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 12:5512:55, 26 September 2014 diff hist +377 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 12:4912:49, 26 September 2014 diff hist +348 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:4312:43, 26 September 2014 diff hist +2,005 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:3512:35, 26 September 2014 diff hist +18 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:3212:32, 26 September 2014 diff hist −1 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:3112:31, 26 September 2014 diff hist −55 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:2912:29, 26 September 2014 diff hist +12 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the release version of DOCK3.7-beta.1.0.1.
- 12:2712:27, 26 September 2014 diff hist +5 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:2612:26, 26 September 2014 diff hist −3 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:2512:25, 26 September 2014 diff hist +2,405 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 12:0912:09, 26 September 2014 diff hist +292 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 12:0612:06, 26 September 2014 diff hist +1,111 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the release version of DOCK3.7-beta.1.0.1.
- 11:5111:51, 26 September 2014 diff hist +7 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 11:5111:51, 26 September 2014 diff hist +739 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 00:3100:31, 26 September 2014 diff hist +41 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the release version of DOCK3.7-beta.1.0.1.
25 September 2014
- 23:3223:32, 25 September 2014 diff hist +2 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 23:2923:29, 25 September 2014 diff hist +218 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 23:2323:23, 25 September 2014 diff hist +45 N File:Lowdiele.png This the low dielectric sphere for Factor Xa. current
- 23:2223:22, 25 September 2014 diff hist +21 N File:Match.png FXa matching spheres. current
- 23:2123:21, 25 September 2014 diff hist +36 N File:Sphgenall.png FXa with sphgen all sphere clusters. current
- 23:2023:20, 25 September 2014 diff hist +127 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 22:0722:07, 25 September 2014 diff hist +107 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the GIST development version of DOCK
- 21:5921:59, 25 September 2014 diff hist −3 DOCK 3.7 2014/09/25 FXa Tutorial →Receptor Preparation
- 21:5821:58, 25 September 2014 diff hist +98 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 21:2621:26, 25 September 2014 diff hist +10 Installing msms No edit summary
- 21:2521:25, 25 September 2014 diff hist −9 Installing msms No edit summary
- 21:2421:24, 25 September 2014 diff hist +493 N Installing msms Created page with "## installation notes. Make a directory: mkdir msms go to the dir: cd /your/path/msms Get it from the web: wget http://mgltools.scripps.edu/downloads/tars/releases/MSMSREL..."
- 21:1621:16, 25 September 2014 diff hist +64 Install DOCK 3.7 No edit summary
- 20:5420:54, 25 September 2014 diff hist +143 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the release version of DOCK3.7-beta.1.0.1.
- 19:2019:20, 25 September 2014 diff hist +2 DOCK 3.7 2014/09/25 FXa Tutorial →This part of the tutorial uses the release version of DOCK3.7-beta.1.0.1.
- 19:2019:20, 25 September 2014 diff hist +356 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 18:4718:47, 25 September 2014 diff hist +19 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 18:4718:47, 25 September 2014 diff hist +19 DOCK 3.7 2014/09/25 FXa Tutorial No edit summary
- 18:3518:35, 25 September 2014 diff hist +874 N DOCK 3.7 2014/09/25 FXa Tutorial Created page with " Written by Trent E Balius and Crystal Nguyen on 2014/09/25 == This part of the tutorial uses the release version of DOCK3.7-beta.1.0.1. == see the following for requirement..."
