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Showing below up to 250 results in range #751 to #1,000.
- So you want to set up a lab (19:38, 10 January 2019)
- Installing DOCK 6 (19:52, 10 January 2019)
- DOCK 3.5 (21:44, 10 January 2019)
- Dock development (21:46, 10 January 2019)
- DOCK 5 (22:17, 10 January 2019)
- DOCK 6 (22:22, 10 January 2019)
- DOCK Accessories (22:43, 10 January 2019)
- Command line arguments in DOCK6 (22:49, 10 January 2019)
- DOCK 4 (23:21, 10 January 2019)
- What does DOCK do? (23:34, 10 January 2019)
- ZINC (23:52, 10 January 2019)
- FAQ:AMBERHOME (00:03, 11 January 2019)
- FAQ:MPICH2 (00:04, 11 January 2019)
- FAQ:mmolex (00:04, 11 January 2019)
- DOCK:FAQ (00:29, 11 January 2019)
- Are critical points/spheres supported in my version of DOCK? (00:29, 11 January 2019)
- DOCK Blaster:Tutorial 1 (02:22, 11 January 2019)
- Server Room Machines (00:27, 12 January 2019)
- Virsh commands (19:47, 4 February 2019)
- PDB surface points for figures (18:50, 6 February 2019)
- Calculate volume of the binding site and molecules (18:51, 6 February 2019)
- AMIS:Gene (19:50, 14 February 2019)
- Chemoinformatics Waiver Wire (19:15, 25 February 2019)
- Tutorial on running Molecular Dynamics for GIST grid generation (00:21, 5 March 2019)
- OEChem (21:17, 13 March 2019)
- Openeye python libraries (23:32, 13 March 2019)
- Filtering ligands for novelty (18:49, 15 March 2019)
- Bemis-Murcko Scaffold Analysis (18:19, 19 March 2019)
- Beta-setup (18:38, 20 March 2019)
- Cert-workaround (16:32, 21 March 2019)
- Ldap workaround (23:28, 25 March 2019)
- Network Access Control (17:15, 26 March 2019)
- How to process results from a large-scale docking (22:39, 26 March 2019)
- Install Miniconda (21:20, 29 March 2019)
- March2019 protocol (02:11, 6 April 2019)
- DOCKovalent lysine inhibitor design tutorial (16:52, 11 April 2019)
- Adding Static Waters to the Protein Structure (19:02, 12 April 2019)
- Analyze ligand geometries using the Cambridge Structural Database (CSD) (23:16, 21 May 2019)
- SELinux notes (18:08, 1 July 2019)
- Testing zinc21 (22:35, 1 July 2019)
- Wynton & BKS (20:32, 8 July 2019)
- Reformatting a USB drive (23:23, 9 July 2019)
- Switch-5-1 (03:44, 13 July 2019)
- DOCKovalent 3.7 (14:36, 29 July 2019)
- Using Wynton (17:46, 6 August 2019)
- Python (20:02, 16 August 2019)
- LogP vs logD (21:51, 19 August 2019)
- Minimize protein-covalent ligand complex with AMBER (13:29, 26 August 2019)
- Protein Target Preparation (16:57, 28 August 2019)
- Using thin spheres in DOCK3.7 (12:41, 4 September 2019)
- Sysadmin idioms (00:05, 10 September 2019)
- Google patents (16:34, 11 September 2019)
- Installing New Server in Cluster (19:53, 12 September 2019)
- JupyterNotebook Guide (18:06, 10 October 2019)
- Protein Target Preparation Updated (18:59, 10 October 2019)
- FastROCS Server (20:45, 10 October 2019)
- Sea16 restart (17:34, 11 October 2019)
- Upload Wizard (18:01, 28 October 2019)
- ZINC15:examples:public (21:41, 29 October 2019)
- Converting SMILES to Kekule Format (19:39, 30 October 2019)
- Queues (18:05, 20 November 2019)
- Tomcat on n-1-136 (21:27, 16 December 2019)
- Creating Maps on SmallWorld (00:11, 9 January 2020)
- How to Install SmartsEditor on CentOS6 (21:51, 10 January 2020)
- Tomcat Installation (22:07, 22 January 2020)
- ZINC via curl (21:08, 11 March 2020)
- Covid19 (16:37, 17 March 2020)
- Nailgun (20:52, 18 March 2020)
- New it team members (19:25, 19 March 2020)
- Useful chimera commands (10:10, 24 March 2020)
- Bootstrap AUC (01:18, 26 March 2020)
- Another get poses.py (01:19, 26 March 2020)
- CSD (00:29, 27 March 2020)
- Prepare a receptor with a cofactor for docking (23:37, 28 March 2020)
- Analyzing DOCK Results (14:34, 30 March 2020)
- Tin jji (22:27, 6 April 2020)
- Runall.sh (19:01, 15 April 2020)
- ViewDock (16:58, 16 April 2020)
- Querying All Arthor Databases With Python (02:03, 17 April 2020)
- Performing a Query on 22B Molecules (23:23, 17 April 2020)
- Rsyncing zinc15 (14:21, 29 April 2020)
- Btz (19:41, 1 May 2020)
- Blah (19:18, 15 May 2020)
- Generating decoys (DUDE-Z) (19:18, 15 May 2020)
- Torsion against CSD visualize with Maestro (20:01, 15 May 2020)
- Matching Sphere Scan (19:19, 21 May 2020)
- Generating extrema set (17:13, 27 May 2020)
- Removing Spheres (The Chase Method) (20:17, 27 May 2020)
- Loading And Creating ZINC Partitions Automatically (04:07, 29 May 2020)
- Why Loading ZINC Is So Slow (00:08, 31 May 2020)
- ZINC20 (22:26, 12 June 2020)
- Tomcat Installation on CentOS 6 (02:22, 10 July 2020)
- New 3D Building On Wynton (22:46, 16 July 2020)
- Sharing file systems with nfs server and mounting file systems with nfs client (17:08, 21 July 2020)
- ZINC22:Getting started (23:05, 3 August 2020)
- Sea cut sum (15:03, 4 August 2020)
- Quartzy and BearBuy (21:51, 4 August 2020)
- DOCK 3.7 tutorial (Anat) (16:46, 19 August 2020)
- Install DOCK 6 (01:28, 2 September 2020)
- ZINC20:Getting started (02:13, 25 September 2020)
- ZINC20:What's New (02:15, 25 September 2020)
- Google sheets hit picking (17:06, 5 October 2020)
- Another getposes.py (05:45, 6 October 2020)
- DNS Notes (22:23, 16 October 2020)
- Other Useful Stuff (04:22, 22 October 2020)
- Calculate RMSD between two sets of molecules (eg, Crystal pose vs. docked pose) (04:30, 22 October 2020)
- Conda environment issue (02:20, 29 October 2020)
- Calculate NPR values & Generate Heatmap (07:49, 5 November 2020)
- HTTPD Semaphore/Mutex Lock Problem (00:54, 26 November 2020)
- ZINC22:Timeline (22:32, 14 December 2020)
- ZINC22:Why (22:40, 14 December 2020)
- UCSF Strain Filtering (01:39, 15 December 2020)
- ZINC22:Downloading (16:11, 17 December 2020)
- ZINC22:Contributors (01:45, 18 December 2020)
- ZINC22 Partitions (04:27, 25 December 2020)
- 2dload.py (07:49, 25 December 2020)
- New Lab Members (20:12, 30 December 2020)
- Welcome group members (21:06, 30 December 2020)
- Flexible Docking: tarting and thin spheres (02:14, 31 December 2020)
- Mount smallworld disks (23:18, 11 January 2021)
- Zinc22 restart wynton (05:46, 19 January 2021)
- How to Replace a Failed Disk (22:49, 25 January 2021)
- DOCK:History (17:01, 27 January 2021)
- ZINC22:Checkout (19:12, 28 January 2021)
- ZINC22:Checkin 3D (19:13, 28 January 2021)
- How to set up a zinc22 docking run (19:15, 28 January 2021)
- Control of bkslab.org (20:56, 2 February 2021)
- List of Docking.org websites (00:43, 3 February 2021)
- ZINC22:Singularity (21:40, 9 February 2021)
- ZINC22:Current status (20:27, 19 February 2021)
- AutoQSAR/DeepChem for billions of molecules (19:12, 12 March 2021)
- Performance testing (22:15, 15 March 2021)
- Selecting tranches in ZINC22 (22:19, 25 March 2021)
- Format And Mount local2 (20:35, 1 April 2021)
- Build new dock64 docker image (17:23, 13 April 2021)
- Create an aws ec2 image (05:53, 19 April 2021)
- Ben DOCKAWS Notes (21:42, 20 April 2021)
- DOCK 6.9 (17:51, 3 May 2021)
- DOCK 6.7 (17:52, 3 May 2021)
- Official file locations (23:20, 3 May 2021)
- DOWNLOAD PKV GAMES APK ANDROID IOS (23:11, 13 May 2021)
- JUDI ONLINE INDONESIA (23:20, 13 May 2021)
- ZINC-22-Growth (22:57, 18 May 2021)
- Python DOCK3.8 (19:02, 28 May 2021)
- Zinc15 to zinc20 transition (22:04, 21 June 2021)
- GPCR Waiver Wire (18:01, 15 July 2021)
- Curating AMIS (16:11, 27 July 2021)
- DOCK 3.7 (17:03, 27 July 2021)
- Unpack-repack (21:29, 29 July 2021)
- 3D In Cori (19:47, 10 August 2021)
- Interaction Filtering (01:54, 18 August 2021)
- 3D Pipeline Explanation (01:27, 24 August 2021)
- How To Load New ZINC Databases (18:50, 8 September 2021)
- Setup ZINC22 database on Server (19:28, 8 September 2021)
- How to do parameter scanning (20:04, 21 September 2021)
- How to Create Cluster 7 (Ubuntu 20.04) (22:36, 26 October 2021)
- AMSOL (13:56, 30 October 2021)
- Pushing Docker Image To AWS (23:16, 2 December 2021)
- Docking in AWS With DOCK 3.8 (23:16, 2 December 2021)
- AWS (23:17, 2 December 2021)
- AWS Auto Scaling (23:18, 2 December 2021)
- Shoichet Lab (22:22, 14 December 2021)
- Create new user (22:47, 4 January 2022)
- ZINC-22:Revision of Feb 1 2022 (17:13, 1 February 2022)
- ZINC-22:One time rearrangement Jan 25 2022 (17:15, 1 February 2022)
- ZINC-22 Clean Up in Jan 2022 (17:18, 1 February 2022)
- ZINC-22 news of Jan-22 (17:10, 2 February 2022)
- Set up a new Desktop (19:07, 9 February 2022)
- Upgrade sqlite3 (06:45, 22 February 2022)
- Switch-6-1 and Switch-7-1 (00:21, 23 February 2022)
- ZINC-22 news of Feb-22 (17:19, 23 February 2022)
- OCI:install client locally (23:39, 23 February 2022)
- ZINC-22:Revision of Feb 23 (01:39, 24 February 2022)
- ZINC-22 news of Mar-22 (15:29, 5 March 2022)
- ZINC22:Fine Tranching with RDKit using Heavy Atom Count and LogP (18:39, 14 March 2022)
- SynthI (03:34, 15 March 2022)
- Install Schrodinger Suite in local computer (06:27, 17 March 2022)
- Log Rotate (00:40, 19 March 2022)
- Andrii's notes on SynthI (19:40, 28 March 2022)
- Mem2 (19:20, 6 April 2022)
- Major themes of this website (21:42, 6 April 2022)
- Firewalld (22:15, 6 April 2022)
- How to create a vpn/ssh tunnel (17:51, 7 April 2022)
- Methods section (21:37, 7 April 2022)
- Coloring and Subcluster Matching (20:37, 12 April 2022)
- Chemspace API (22:56, 12 April 2022)
- PuppetTricks (00:45, 28 April 2022)
- Self-Signed SSL Certificate / Certbot (21:52, 11 May 2022)
- 2dload (22:41, 13 May 2022)
- Replacing failed disk on Server (18:20, 17 May 2022)
- ABBBR (17:21, 21 May 2022)
- Conversion of .rxn files to reaction SMARTS (21:14, 6 June 2022)
- How to use Blastermaster 2.0 on UCSF computers (19:31, 7 June 2022)
- PyMol (21:17, 8 June 2022)
- Curation of ZINC-22 3D (19:10, 17 June 2022)
- Search zinc22.py (21:15, 24 June 2022)
- Legacy IDs in ZINC22 (18:09, 30 June 2022)
- Set up a Server (03:03, 8 July 2022)
- DOCK memory and CPU benchmark (19:38, 25 July 2022)
- INDOCK (22:11, 25 July 2022)
- Dockmaster (22:14, 25 July 2022)
- AWS DOCK Environment Setup Advanced Usage (17:51, 28 July 2022)
- How to download zinc-22 using rsync (21:10, 3 August 2022)
- Dimorphite-DL (22:01, 4 August 2022)
- UCSF ZINC License (19:35, 7 August 2022)
- ZINC22:Directory structure (19:51, 7 August 2022)
- TLDR:arthorbatch (05:26, 9 August 2022)
- TLDR:bioisostere (05:27, 9 August 2022)
- TLDR:bootstrap1 (05:28, 9 August 2022)
- TLDR:bootstrap2 (05:28, 9 August 2022)
- TLDR:extrema (05:29, 9 August 2022)
- TLDR:newbuild3d (05:29, 9 August 2022)
- TLDR:strain (05:29, 9 August 2022)
- TLDR:swbatch (05:29, 9 August 2022)
- Using AWS Setup For Cloud Computation (16:38, 9 August 2022)
- OCI Slurm Autoscaling (16:39, 9 August 2022)
- Preparing dockfiles using TLDR (18:43, 9 August 2022)
- ZINC-22:Select chemical space for docking (18:52, 9 August 2022)
- AWS:Upload docking files to aws (18:58, 9 August 2022)
- TLDR:Library Enumeration (00:16, 18 August 2022)
- Ssh tunnel (Trent's way) (18:16, 18 August 2022)
- CC:Library preparation (19:10, 29 August 2022)
- CC:Smallworld (19:24, 29 August 2022)
- CC:Arthor (19:25, 29 August 2022)
- Bioisosteres (19:30, 29 August 2022)
- Copy protect in google docs (18:09, 30 August 2022)
- Tunnel how to (20:36, 31 August 2022)
- DOCK38:Job configuration (19:01, 1 September 2022)
- How to Relay Emails to Gmail (22:43, 1 September 2022)
- Ucsfdock (06:40, 2 September 2022)
- Blastermaster2.0 (08:16, 2 September 2022)
- Strain Filtering (19:44, 8 September 2022)
- AWS:Track costs (22:26, 13 September 2022)
- AWS:Cleanup (21:29, 14 September 2022)
- AWS:Merge and download results (21:30, 14 September 2022)
- Programming DOCK 3.8 (23:23, 14 September 2022)
- DOCK Blaster (22:07, 16 September 2022)
- Generating decoys (Reed's way) (07:49, 23 September 2022)
- ZINC22:Numbering (20:57, 28 September 2022)
- FastROCS (20:23, 7 October 2022)
- Synthesia (17:43, 11 October 2022)
- AWS:Upload files for docking (22:10, 11 October 2022)
- AWS:Submit docking job (22:11, 11 October 2022)
- Add Tools18 module (19:30, 18 October 2022)
- How I Migrated Wiki from Centos 6 to Centos 7 (21:28, 18 October 2022)
- AWS:Set up account (20:38, 19 October 2022)
- DOCK 3.8:How to install pydock3 (23:37, 2 November 2022)
- ABBB (18:46, 4 November 2022)
- Bioisostere Tool (18:48, 4 November 2022)
- How to dock in DOCK3.8 (22:28, 1 December 2022)