Rsyncing zinc15: Difference between revisions

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(ZINC-3D -> 3D)
m (asdf)
Line 10: Line 10:
  rsync -a --progress files.docking.org:3D/[C-E][A-G]/ /local/copy/of/zinc
  rsync -a --progress files.docking.org:3D/[C-E][A-G]/ /local/copy/of/zinc


# Download only db2 files and mol2 files for all tranches
# Download only db2 files  
  rsync -a --progress --include="*.mol2.gz" --include="*.db2.gz" --include="*/" --exclude="*" files.docking.org:3D/ /local/copy/of/zinc
  rsync -L  -a --progress --include="[C-E][A-G]*.db2.gz" --exclude="[ABFGHIJK]*" rsync://files.docking.org/ZINC-3D/ zinc

Revision as of 23:38, 2 September 2018

A few examples below:

  1. Browse the database
rsync --list-only files.docking.org:3D/
  1. Download EVERYTHING
rysnc -a --progress files.docking.org:3D/ /local/copy/of/zinc
  1. Download EVERYTHING only in leadlike (tranches CA-EG)
rsync -a --progress files.docking.org:3D/[C-E][A-G]/ /local/copy/of/zinc
  1. Download only db2 files
rsync -L  -a --progress  --include="[C-E][A-G]*.db2.gz" --exclude="[ABFGHIJK]*" rsync://files.docking.org/ZINC-3D/  zinc