Rsyncing zinc15: Difference between revisions

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(ZINC-3D -> 3D)
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# Browse the database
# Browse the database
  rsync --list-only files.docking.org:ZINC-3D/
  rsync --list-only files.docking.org:3D/


# Download EVERYTHING
# Download EVERYTHING
  rysnc -a --progress files.docking.org:ZINC-3D/ /local/copy/of/zinc
  rysnc -a --progress files.docking.org:3D/ /local/copy/of/zinc


# Download EVERYTHING only in leadlike (tranches CA-EG)
# Download EVERYTHING only in leadlike (tranches CA-EG)
  rsync -a --progress files.docking.org:ZINC-3D/[C-E][A-G]/ /local/copy/of/zinc
  rsync -a --progress files.docking.org:3D/[C-E][A-G]/ /local/copy/of/zinc


# Download only db2 files and mol2 files for all tranches
# Download only db2 files and mol2 files for all tranches
  rsync -a --progress --include="*.mol2.gz" --include="*.db2.gz" --include="*/" --exclude="*" files.docking.org:ZINC-3D/ /local/copy/of/zinc
  rsync -a --progress --include="*.mol2.gz" --include="*.db2.gz" --include="*/" --exclude="*" files.docking.org:3D/ /local/copy/of/zinc

Revision as of 19:09, 25 July 2016

A few examples below:

  1. Browse the database
rsync --list-only files.docking.org:3D/
  1. Download EVERYTHING
rysnc -a --progress files.docking.org:3D/ /local/copy/of/zinc
  1. Download EVERYTHING only in leadlike (tranches CA-EG)
rsync -a --progress files.docking.org:3D/[C-E][A-G]/ /local/copy/of/zinc
  1. Download only db2 files and mol2 files for all tranches
rsync -a --progress --include="*.mol2.gz" --include="*.db2.gz" --include="*/" --exclude="*" files.docking.org:3D/ /local/copy/of/zinc