Rsyncing zinc15: Difference between revisions

Revision as of 12:34, 16 October 2018

A few examples below:

rsync --list-only rsync://files.docking.org

rsync -L  -a --progress  --include="[ABCDEFG][A-G]*.smi" --exclude="[HIJK]*" rsync://files.docking.org/ZINC-2D/ zinc

rsync -L  -a --progress  --include="[ABCDEFG][A-G]*.db2.gz" --exclude="[HIJK]*" rsync://files.docking.org/ZINC-3D/  zinc

@@ Line 1: / Line 1: @@
 A few examples below:
-# Browse the database
+# what is available?
-  rsync --list-only files.docking.org:3D/
+  rsync --list-only rsync://files.docking.org
-# Download EVERYTHING
+# download 2D
-  rysnc -a --progress files.docking.org:3D/ /local/copy/of/zinc
+  rsync -L  -a --progress  --include="[ABCDEFG][A-G]*.smi" --exclude="[HIJK]*" rsync://files.docking.org/ZINC-2D/ zinc
-# Download EVERYTHING only in leadlike (tranches CA-EG)
+# download 3D
- rsync -a --progress files.docking.org:3D/[C-E][A-G]/ /local/copy/of/zinc
+  rsync -L  -a --progress  --include="[ABCDEFG][A-G]*.db2.gz" --exclude="[HIJK]*" rsync://files.docking.org/ZINC-3D/  zinc
-# Download only db2 files
-  rsync -L  -a --progress  --include="[C-E][A-G]*.db2.gz" --exclude="[ABFGHIJK]*" rsync://files.docking.org/ZINC-3D/  zinc