Problems: Difference between revisions
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This is the general problem page at docking.org. There are also specific problem pages as follows: | This is the general problem page at docking.org. There are also specific problem pages as follows: | ||
* [[DOCK Blaster:Problems]] | * [[DOCK Blaster:Problems]] | ||
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= Technical Problems = | = Technical Problems = | ||
Technical problems are ones where we think we know pretty well exactly how to solve them, algorithmically. Scientific problems may be technical, but are differentiated because I cannot describe algorithmically how to solve them. Instead, we should take an experimental approach, probably trying at least two different ways, and seeing which works best. Philosophical problems in this context means that I am not even sure how to phrase a scientific question or a testable hypothesis, but I recognize that there is a problem. | Technical problems are ones where we think we know pretty well exactly how to solve them, algorithmically. Scientific problems may be technical, but are differentiated because I cannot describe algorithmically how to solve them. Instead, we should take an experimental approach, probably trying at least two different ways, and seeing which works best. Philosophical problems in this context means that I am not even sure how to phrase a scientific question or a testable hypothesis, but I recognize that there is a problem. | ||
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== DOCK Tools == | == DOCK Tools == | ||
Revision as of 16:01, 7 August 2009
This is the general problem page at docking.org. There are also specific problem pages as follows:
Technical Problems
Technical problems are ones where we think we know pretty well exactly how to solve them, algorithmically. Scientific problems may be technical, but are differentiated because I cannot describe algorithmically how to solve them. Instead, we should take an experimental approach, probably trying at least two different ways, and seeing which works best. Philosophical problems in this context means that I am not even sure how to phrase a scientific question or a testable hypothesis, but I recognize that there is a problem.
DOCK Tools
- documentation
Infrastructure
- more disk space on line
Scientific Problems
Docking
- treatment of entropy
- treatment of receptor desolvation
- treatment of induced-fit effects
- ligand internal energy