Pipeline pilot: Difference between revisions

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(Added content from "PIPELINE PILOT INSTALLATION" section from lab manual)
 
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We license pipeline pilot.  If you are just starting a project, we urge you to attempt to use [[Knime]].  
We license pipeline pilot.  If you are just starting a project, we urge you to attempt to use [[Knime]].  
==Installation==
How to install ppilot:
System Requirements: http://accelrys.com/products/pipeline-pilot/system-requirements-70.html
Opened ports:
First create a ppilot user.
Move the ppilot tar file and the accelrys license (ppilot license) to the desired location and extract it.
Then, as root run the sciseallow file.
Then, as ppilot, run the sciinstall file:
-sh-4.1$ ./sciinstall
Install the Pipeline Pilot Server on the following:
RHEL 5
SLES 11
Unrecognized Red Hat version.
Continue with the installation? (y or n)
y
Your system appears to have SE Linux extensions enabled.
If you have not already done so, run the sciseallow script
as root in the installation directory.
The installation directory is the directory the software
is being installed from: /mnt/nfs/soft/ppilot/PP85_with_CU5_Linux64
Installation may fail if this is not done before
product installation.
Continue with the installation? (y or n)
>>>[y]y
********************************************
*  Pipeline Pilot Server 8.5 Installation  *
********************************************
    1.  Install a new server
    2.  Reinstall an existing installation
    3.  Upgrade an existing installation
    4.  Install a new server to a new location and upgrade the database from existing installation
    5.  Add/Remove packages from an existing installation
Choose (1-5)>>>[1]1
Enter the target directory for the server installation.
>>>/nfs/soft/ppilot/
Confirm path for the server installation:
/nfs/soft/ppilot
Is this correct? (y or n)
>>>[y]y
Enter the path to your license file.
>>>/nfs/soft/ppilot/PP85_with_CU5_Linux64/Licenses/scitegic.lic
            Package                    License        Status        Action
  1. Core                                Yes      Not Installed    Install   
  -. ADMET                                No      Not Installed    -         
  -. ADMET Data                          No      Not Installed    -         
  4. Admin Portal                        Yes      Not Installed    Install   
  -. Analytical Instrumentation          No      Not Installed    -         
  -. Biological Registration              No      Not Installed    -         
  -. Biological Registration Application  No      Not Installed    -         
  -. Biology Utilities                    No      Not Installed    -         
  9. Chemistry                          Yes      Not Installed    Install   
10. Chemistry Advanced                  Yes      Not Installed    Install   
  -. Direct Chemistry Cartridge          No      Not Installed    -         
12. Database Content                    Yes      Not Installed    Install   
13. Chemistry Data                      Yes      Not Installed    Install   
14. Chemistry Molecular Toolkit        Yes      Not Installed    Install   
  -. ChemMining                          No      Not Installed    -         
  -. Chemical Registration                No      Not Installed    -         
  -. Chemical Registration Application    No      Not Installed    -         
18. Client SOAP SDK                    Yes      Not Installed    Install   
19. Client SDK - .NET                  Yes      Not Installed    Install   
20. Client SDK - Java                  Yes      Not Installed    Install   
21. Client SDK - JavaScript            Yes      Not Installed    Install   
22. Core Utilities                      Yes      Not Installed    Install   
23. Data Access                        Yes      Not Installed    Install   
  -. Database Search                      No      Not Installed    -         
  -. Decision Trees                      No      Not Installed    -         
26. Platform Documentation              Yes      Not Installed    Install   
  -. Discovery Studio Client              No      Not Installed    -         
  -. Discovery Studio Core                No      Not Installed    -         
  -. Discovery Studio LicensePack        No      Not Installed    -         
  -. Discovery Studio Pharmacophore      No      Not Installed    -         
  -. Discovery Studio Protein Modeling    No      Not Installed    -         
  -. Discovery Studio QM                  No      Not Installed    -         
  -. Discovery Studio QSAR                No      Not Installed    -         
  -. Discovery Studio SBD                No      Not Installed    -         
  -. Discovery Studio Simulation          No      Not Installed    -         
  -. Discovery Studio X-ray              No      Not Installed    -         
  -. GEMS                                No      Not Installed    -         
  -. GEMS Application                    No      Not Installed    -         
  -. Gene Expression                      No      Not Installed    -         
  -. Gene Expression Data                No      Not Installed    -         
41. Generic                            Yes      Not Installed    Install   
  -. Imaging                              No      Not Installed    -         
  -. Imaging Advanced                    No      Not Installed    -         
  -. Imaging Advanced Data                No      Not Installed    -         
  -. Imaging Data                        No      Not Installed    -         
46. Integration                        Yes      Not Installed    Install   
47. Java Server                        Yes      Not Installed    None     
  -. App Launcher                        No      Not Installed    Embed     
  -. List Management and Query Services  No      Not Installed    -         
  -. List Management and Query Services Application  No      Not Installed    -         
  -. Mass Spec Proteomics                No      Not Installed    -         
  -. Mass Spec Proteomics Data            No      Not Installed    -         
  -. Materials Studio                    No      Not Installed    -         
  -. Data Modeling                        No      Not Installed    -         
  -. Advanced Data Modeling              No      Not Installed    -         
  -. Next Gen Sequencing                  No      Not Installed    -         
  -. Next Gen Sequencing Data            No      Not Installed    -         
  -. Plate Data Analytics                No      Not Installed    -         
  -. Polymer Properties (Synthia)        No      Not Installed    -         
60. Portlets                            Yes      Not Installed    Install   
61. Pipeline Pilot Client              Yes      Not Installed    Install   
  -. Query Service                        No      Not Installed    -         
  -. Registration                        No      Not Installed    -         
64. Reporting                          Yes      Not Installed    Install   
65. Reporting (Web Apps)                Yes      Not Installed    Install   
66. RSS Integration                    Yes      Not Installed    Install   
  -. R Statistics                        No      Not Installed    -         
  -. Sequence Analysis                    No      Not Installed    -         
  -. Sequence Analysis Data              No      Not Installed    -         
70. SharePoint Bridge                  Yes      Not Installed    Install   
  -. Text Analytics                      No      Not Installed    -         
  -. Web Application Framework            No      Not Installed    Embed     
73. Web Port                            Yes      Not Installed    Install   
74. Web Services                        Yes      Not Installed    Install   
Required Space: 1.10 GB, Available Space: 1572.90 GB
Choose a package number to toggle its action (1-74)>>>[y] y
The server will use the following default ports:
HTTP: 9944
HTTPS: 9943
To accept these default ports, press Y.
To change these ports, press N.
Accept default ports? (y or n)
>>>[y] y
Enter the lock file directory path.
>>>[/var/tmp] ENTER
If this machine is the primary node in a cluster, select a cluster method:
    1. This node is not in a cluster
    2. Round Robin
    3. Job Leveling
Choose (1-3)>>>[1] 1
Pipeline Pilot Server will perform the Install
    Version: 8.5.5
    Update ID: Collection Update 5
    Target Directory: /nfs/soft/ppilot
    Mutex Directory: /var/tmp/scitegic-mutexes-9944
    HTTP Port: 9944
    HTTPS Port: 9943
    Component collections to install:
        Core
        Admin Portal
        Chemistry
        Chemistry Advanced
        Database Content
        Chemistry Data
        Chemistry Molecular Toolkit
        Client SOAP SDK
        Client SDK - .NET
        Client SDK - Java
        Client SDK - JavaScript
        Core Utilities
        Data Access
        Platform Documentation
        Generic
        Integration
        Portlets
        Pipeline Pilot Client
        Reporting
        Reporting (Web Apps)
        RSS Integration
        SharePoint Bridge
        Web Port
        Web Services
    Component collections to embed:
        App Launcher
        Web Application Framework
Please wait while the installer initializes...
Deleting Packages
    /nfs/soft/ppilot/apps/scitegic
Installing Packages
    Copying Files for Core
    Copying Files for Admin Portal
    Copying Files for Chemistry
    Copying Files for Chemistry Advanced
    Copying Files for Database Content
    Copying Files for Chemistry Data
    Copying Files for Chemistry Molecular Toolkit
    Copying Files for Client SOAP SDK
    Copying Files for Client SDK - .NET
    Copying Files for Client SDK - Java
    Copying Files for Client SDK - JavaScript
    Copying Files for Core Utilities
    Copying Files for Data Access
    Copying Files for Platform Documentation
    Copying Files for Generic
    Copying Files for Integration
    Copying Files for App Launcher
    Copying Files for Portlets
    Copying Files for Pipeline Pilot Client
    Copying Files for Reporting
    Copying Files for Reporting (Web Apps)
    Copying Files for RSS Integration
    Copying Files for SharePoint Bridge
    Copying Files for Web Application Framework
    Copying Files for Web Port
    Copying Files for Web Services
Setting Permissions
    On directory /nfs/soft/ppilot
Preparing to back up xmldb
Replacing Tokens
Write token configuration file /nfs/soft/ppilot/install/tokens.config
Preparing to Register Components
Registering Shared Libraries
    libvcmath.so
    libvccore.so
    libwssoaputils.so
    libwsoldsoap.so
    libcsharpplugin.so
    libpcmjavaplugin.so
    libjpeg.so.62
    libuwin32.so
    libitfhelp.so
    libpcmperlplugin.so
    libwslocator.so
    libvcbase.so
    libvcparser.so
    libvcbaseclient.so
    libpluginexamples.so
    libpilot.so
    libwsxmldb.so
    libvcssl.so
    libpilotcore.so
    libpackaging.so
    libwsfile.so
    libwsrunner.so
    libremotewrappers2.so
    libjniutils.so
    libplugintemplate.so
    libxmldb.so
    libwsprotocol.so
    libpcmcomponents.so
    libwslog.so
    libxmlio.so
    liblpl.so
    libeasysoap.so
Deactivating Package
    /                                                                                                                 
Working on all packages for vendor \ :
scitegic/admin
scitegic/chemistry
scitegic/chemistryadv
scitegic/chemistrycontent
scitegic/chemistrydata
scitegic/chemistrytlkt
scitegic/clientsdk
scitegic/clientsdkdotnet
scitegic/clientsdkjava
scitegic/clientsdkjavascript
scitegic/core
scitegic/coreutils
scitegic/dataaccess
scitegic/docs
scitegic/generic
scitegic/integration
scitegic/launcher
scitegic/portlets
scitegic/ppclient
scitegic/report
scitegic/reportadv
scitegic/rss
scitegic/sharepoint
scitegic/waf
scitegic/web
scitegic/websvc
-- All components
    Unregistering Components and Protocols for all  packages
-- Package scitegic/websvc
-- Package scitegic/web
-- Package scitegic/waf
-- Package scitegic/sharepoint
-- Package scitegic/rss
-- Package scitegic/reportadv
-- Package scitegic/ppclient
-- Package scitegic/portlets
-- Package scitegic/launcher
-- Package scitegic/dataaccess
-- Package scitegic/integration
-- Package scitegic/coreutils
-- Package scitegic/clientsdkjavascript
-- Package scitegic/clientsdkjava
-- Package scitegic/clientsdkdotnet
-- Package scitegic/clientsdk
-- Package scitegic/chemistrytlkt
-- Package scitegic/chemistrydata
-- Package scitegic/chemistrycontent
-- Package scitegic/chemistryadv
-- Package scitegic/chemistry
-- Package scitegic/report
-- Package scitegic/admin
-- Package scitegic/generic
-- Package scitegic/docs
-- Package scitegic/core
    /
Deactivating Package
    scitegic/core                                                                                                     
-- Package scitegic/core
    scitegic/core
Activating Package
    scitegic/core                                                                                                     
++ Package scitegic/core
    Perl: "/nfs/soft/ppilot/apps/scitegic/core/localbin/cleanxmldbobjects.pl" "/nfs/soft/ppilot"
    Command: /nfs/soft/ppilot/linux_bin/DbUtil -ssl
    Merging configuration files
    Refreshing authorization roles
    Package installation successful.
    scitegic/core
Deactivating Package
    scitegic/docs                                                                                                     
-- Package scitegic/docs
    scitegic/docs
Activating Package
    scitegic/docs                                                                                                     
++ Package scitegic/docs
    Copying files
    Command: chmod a+x "/nfs/soft/ppilot/linux_bin/Help.cgi"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmhelp.so"
    Merging configuration files
    Package installation successful.
    scitegic/docs
Deactivating Package
    scitegic/generic                                                                                                   
-- Package scitegic/generic
    Unregistering Components and Protocols
    scitegic/generic
Activating Package
    scitegic/generic                                                                                                   
++ Package scitegic/generic
    Copying files
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libvcmodeling.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libvcodbc.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbasecalculators.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbasedatamodel.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbasegenerators.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbaseintegration.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbasescreens.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbasesources.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbaseui.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbasewriters.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmlearn.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmrdbms.so"
    Merging configuration files
    Registering Components..........................................................................................................................................................................................................................................
    Registering Protocols........................................................................
    Package installation successful.
    scitegic/generic
Deactivating Package
    scitegic/admin                                                                                                     
-- Package scitegic/admin
    scitegic/admin
Activating Package
    scitegic/admin                                                                                                     
++ Package scitegic/admin
    Copying files
    Command: chmod a+x "/nfs/soft/ppilot/linux_bin/Admin.cgi"
    Merging configuration files
    Package installation successful.
    scitegic/admin
Deactivating Package
    scitegic/report                                                                                                   
-- Package scitegic/report
    Unregistering Components and Protocols
    scitegic/report
Activating Package
    scitegic/report                                                                                                   
++ Package scitegic/report
    Merging configuration files
    Registering Components..........................................................................................
    Registering Protocols...............................................
    Indexing documentation
    Package installation successful.
    scitegic/report
Deactivating Package
    scitegic/chemistry                                                                                                 
-- Package scitegic/chemistry
    Unregistering Components and Protocols
    scitegic/chemistry
Activating Package
    scitegic/chemistry                                                                                                 
++ Package scitegic/chemistry
    Copying files
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmchemcalculators.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmchemgenerators.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmchemscreens.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmchemsources.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmchemwriters.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmchemmdl.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libxmliochem.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libvcdm.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libvcdmutil.so"
    Merging configuration files
    Registering Components.......................................................................................................................................................................................................................................................................
    Registering Protocols........................................................................
    Indexing documentation
    Package installation successful.
    scitegic/chemistry
Deactivating Package
    scitegic/chemistryadv                                                                                             
-- Package scitegic/chemistryadv
    Unregistering Components and Protocols
    scitegic/chemistryadv
Activating Package
    scitegic/chemistryadv                                                                                             
++ Package scitegic/chemistryadv
    Merging configuration files
    Registering Components.................................................................
    Registering Protocols.................................................................
    Indexing documentation
    Package installation successful.
    scitegic/chemistryadv
Deactivating Package
    scitegic/chemistrycontent                                                                                         
-- Package scitegic/chemistrycontent
    Unregistering Components and Protocols
    scitegic/chemistrycontent
Activating Package
    scitegic/chemistrycontent                                                                                         
++ Package scitegic/chemistrycontent
    Merging configuration files
    Registering Components..................................
    Registering Protocols................
    Package installation successful.
    scitegic/chemistrycontent
Deactivating Package
    scitegic/chemistrydata                                                                                             
-- Package scitegic/chemistrydata
    scitegic/chemistrydata
Activating Package
    scitegic/chemistrydata                                                                                             
++ Package scitegic/chemistrydata
    Merging configuration files
    Package installation successful.
    scitegic/chemistrydata
Deactivating Package
    scitegic/chemistrytlkt                                                                                             
-- Package scitegic/chemistrytlkt
    Unregistering Components and Protocols
    scitegic/chemistrytlkt
Activating Package
    scitegic/chemistrytlkt                                                                                             
++ Package scitegic/chemistrytlkt
    Copying files
    Merging configuration files
    Registering Components.......
    Registering Protocols.......................
    Indexing documentation
    Package installation successful.
    scitegic/chemistrytlkt
Deactivating Package
    scitegic/clientsdk                                                                                                 
-- Package scitegic/clientsdk
    scitegic/clientsdk
Activating Package
    scitegic/clientsdk                                                                                                 
++ Package scitegic/clientsdk
    Merging configuration files
    Package installation successful.
    scitegic/clientsdk
Deactivating Package
    scitegic/clientsdkdotnet                                                                                           
-- Package scitegic/clientsdkdotnet
    scitegic/clientsdkdotnet
Activating Package
    scitegic/clientsdkdotnet                                                                                           
++ Package scitegic/clientsdkdotnet
    Merging configuration files
    Package installation successful.
    scitegic/clientsdkdotnet
Deactivating Package
    scitegic/clientsdkjava                                                                                             
-- Package scitegic/clientsdkjava
    scitegic/clientsdkjava
Activating Package
    scitegic/clientsdkjava                                                                                             
++ Package scitegic/clientsdkjava
    Merging configuration files
    Package installation successful.
    scitegic/clientsdkjava
Deactivating Package
    scitegic/clientsdkjavascript                                                                                       
-- Package scitegic/clientsdkjavascript
    scitegic/clientsdkjavascript
Activating Package
    scitegic/clientsdkjavascript                                                                                       
++ Package scitegic/clientsdkjavascript
    Merging configuration files
    Package installation successful.
    scitegic/clientsdkjavascript
Deactivating Package
    scitegic/coreutils                                                                                                 
-- Package scitegic/coreutils
    Unregistering Components and Protocols
    scitegic/coreutils
Activating Package
    scitegic/coreutils                                                                                                 
++ Package scitegic/coreutils
    Merging configuration files
    Registering Components.......
    Package installation successful.
    scitegic/coreutils
Deactivating Package
    scitegic/integration                                                                                               
-- Package scitegic/integration
    Unregistering Components and Protocols
    scitegic/integration
Activating Package
    scitegic/integration                                                                                               
++ Package scitegic/integration
    Merging configuration files
    Registering Components...........................................
    Registering Protocols..........................................
    Package installation successful.
    scitegic/integration
Deactivating Package
    scitegic/dataaccess                                                                                               
-- Package scitegic/dataaccess
    Unregistering Components and Protocols
    scitegic/dataaccess
Activating Package
    scitegic/dataaccess                                                                                               
++ Package scitegic/dataaccess
    Command: rm -f "/nfs/soft/ppilot/xmldb/Objects/JdbcDriver.xml"
    Merging configuration files
    Registering Components.....................................
    Registering Protocols.....................
    Package installation successful.
    scitegic/dataaccess
Deactivating Package
    scitegic/launcher                                                                                                 
-- Package scitegic/launcher
    Unregistering Components and Protocols
    scitegic/launcher
Embedding Package
    scitegic/launcher                                                                                                 
++ Package scitegic/launcher
    Merging configuration files
    Registering Protocols.
    Package installation successful.
    scitegic/launcher
Deactivating Package
    scitegic/portlets                                                                                                 
-- Package scitegic/portlets
    scitegic/portlets
Activating Package
    scitegic/portlets                                                                                                 
++ Package scitegic/portlets
    Merging configuration files
    Package installation successful.
    scitegic/portlets
Deactivating Package
    scitegic/ppclient                                                                                                 
-- Package scitegic/ppclient
    scitegic/ppclient
Activating Package
    scitegic/ppclient                                                                                                 
++ Package scitegic/ppclient
    Merging configuration files
    Package installation successful.
    scitegic/ppclient
Deactivating Package
    scitegic/reportadv                                                                                                 
-- Package scitegic/reportadv
    Unregistering Components and Protocols
    scitegic/reportadv
Activating Package
    scitegic/reportadv                                                                                                 
++ Package scitegic/reportadv
    Merging configuration files
    Registering Components....................................
    Registering Protocols.....................................................
    Indexing documentation
    Package installation successful.
    scitegic/reportadv
Deactivating Package
    scitegic/rss                                                                                                       
-- Package scitegic/rss
    Unregistering Components and Protocols
    scitegic/rss
Activating Package
    scitegic/rss                                                                                                       
++ Package scitegic/rss
    Merging configuration files
    Registering Components..........
    Registering Protocols...
    Indexing documentation
    Package installation successful.
    scitegic/rss
Deactivating Package
    scitegic/sharepoint                                                                                               
-- Package scitegic/sharepoint
    Unregistering Components and Protocols
    scitegic/sharepoint
Activating Package
    scitegic/sharepoint                                                                                               
++ Package scitegic/sharepoint
    Merging configuration files
    Registering Protocols..
    Indexing documentation
    Package installation successful.
    scitegic/sharepoint
Deactivating Package
    scitegic/waf                                                                                                       
-- Package scitegic/waf
    Unregistering Components and Protocols
    scitegic/waf
Embedding Package
    scitegic/waf                                                                                                       
++ Package scitegic/waf
    Merging configuration files
    Registering Components........................
    Registering Protocols..............
    Package installation successful.
    scitegic/waf
Deactivating Package
    scitegic/web                                                                                                       
-- Package scitegic/web
    scitegic/web
Activating Package
    scitegic/web                                                                                                       
++ Package scitegic/web
    Perl: "/nfs/soft/ppilot/apps/scitegic/web/customize/customize_webport.pl" "default" "-install" "-overwrite"
    Merging configuration files
    Refreshing authorization roles
    Indexing documentation
    Package installation successful.
    scitegic/web
Deactivating Package
    scitegic/websvc                                                                                                   
-- Package scitegic/websvc
    Unregistering Components and Protocols
    scitegic/websvc
Activating Package
    scitegic/websvc                                                                                                   
++ Package scitegic/websvc
    Copying files
    Command: chmod a+x "/nfs/soft/ppilot/linux_bin/Cache.cgi"
    Command: chmod a+x "/nfs/soft/ppilot/linux_bin/CgiFile.cgi"
    Command: chmod a+x "/nfs/soft/ppilot/linux_bin/libwsprotocoldoc.so"
    Command: chmod a+x "/nfs/soft/ppilot/linux_bin/libwsprotocolwsse.so"
    Command: chmod a+x "/nfs/soft/ppilot/linux_bin/libwsprotocol4wsdl.so"
    Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/apache2servicemodules.so"
    Merging configuration files
    Registering Components...
    Package installation successful.
    scitegic/websvc
Starting Apache
Starting Pipeline Pilot server on zeta.cluster.ucsf.bkslab.org...
Refresh HTTPD configuration file: /nfs/soft/ppilot/apps/scitegic/core/packages_linux64/apache/httpd-2.2.16/conf/httpd-zeta.cluster.ucsf.bkslab.org.conf
Check /nfs/soft/ppilot/logs/startservererror-zeta.cluster.ucsf.bkslab.org.txt
Done
FINISHED
Setting permissions on installed files
Creating link /nfs/soft/ppilot/apps/scitegic/core/packages_linux64/datadirect/locale/en_US.UTF-8 to ODBC driver messages
Installation complete.
NOTE: To configure the server for local authentication, impersonation
or to install a boot script, run the scirootinstall script as root:
/nfs/soft/ppilot/install/scripts/scirootinstall


[[Category:Commercial]]
[[Category:Commercial]]
[[Category:Software]]
[[Category:Software]]
[[Category:Sysadmin]]

Latest revision as of 18:46, 30 June 2016

We license pipeline pilot. If you are just starting a project, we urge you to attempt to use Knime.

Installation

How to install ppilot:

System Requirements: http://accelrys.com/products/pipeline-pilot/system-requirements-70.html

Opened ports: First create a ppilot user. Move the ppilot tar file and the accelrys license (ppilot license) to the desired location and extract it. Then, as root run the sciseallow file. Then, as ppilot, run the sciinstall file:

-sh-4.1$ ./sciinstall Install the Pipeline Pilot Server on the following: RHEL 5 SLES 11

Unrecognized Red Hat version.

Continue with the installation? (y or n) y Your system appears to have SE Linux extensions enabled. If you have not already done so, run the sciseallow script as root in the installation directory. The installation directory is the directory the software is being installed from: /mnt/nfs/soft/ppilot/PP85_with_CU5_Linux64 Installation may fail if this is not done before product installation.

Continue with the installation? (y or n) >>>[y]y

  • Pipeline Pilot Server 8.5 Installation *
   1.  Install a new server
   2.  Reinstall an existing installation
   3.  Upgrade an existing installation
   4.  Install a new server to a new location and upgrade the database from existing installation
   5.  Add/Remove packages from an existing installation


Choose (1-5)>>>[1]1

Enter the target directory for the server installation. >>>/nfs/soft/ppilot/


Confirm path for the server installation: /nfs/soft/ppilot Is this correct? (y or n) >>>[y]y


Enter the path to your license file. >>>/nfs/soft/ppilot/PP85_with_CU5_Linux64/Licenses/scitegic.lic

           Package                    License         Status        Action
 1. Core                                Yes       Not Installed     Install    
 -. ADMET                                No       Not Installed     -          
 -. ADMET Data                           No       Not Installed     -          
 4. Admin Portal                        Yes       Not Installed     Install    
 -. Analytical Instrumentation           No       Not Installed     -          
 -. Biological Registration              No       Not Installed     -          
 -. Biological Registration Application   No       Not Installed     -          
 -. Biology Utilities                    No       Not Installed     -          
 9. Chemistry                           Yes       Not Installed     Install    
10. Chemistry Advanced                  Yes       Not Installed     Install    
 -. Direct Chemistry Cartridge           No       Not Installed     -          
12. Database Content                    Yes       Not Installed     Install    
13. Chemistry Data                      Yes       Not Installed     Install    
14. Chemistry Molecular Toolkit         Yes       Not Installed     Install    
 -. ChemMining                           No       Not Installed     -          
 -. Chemical Registration                No       Not Installed     -          
 -. Chemical Registration Application    No       Not Installed     -          
18. Client SOAP SDK                     Yes       Not Installed     Install    
19. Client SDK - .NET                   Yes       Not Installed     Install    
20. Client SDK - Java                   Yes       Not Installed     Install    
21. Client SDK - JavaScript             Yes       Not Installed     Install    
22. Core Utilities                      Yes       Not Installed     Install    
23. Data Access                         Yes       Not Installed     Install    
 -. Database Search                      No       Not Installed     -          
 -. Decision Trees                       No       Not Installed     -          
26. Platform Documentation              Yes       Not Installed     Install    
 -. Discovery Studio Client              No       Not Installed     -          
 -. Discovery Studio Core                No       Not Installed     -          
 -. Discovery Studio LicensePack         No       Not Installed     -          
 -. Discovery Studio Pharmacophore       No       Not Installed     -          
 -. Discovery Studio Protein Modeling    No       Not Installed     -          
 -. Discovery Studio QM                  No       Not Installed     -          
 -. Discovery Studio QSAR                No       Not Installed     -          
 -. Discovery Studio SBD                 No       Not Installed     -          
 -. Discovery Studio Simulation          No       Not Installed     -          
 -. Discovery Studio X-ray               No       Not Installed     -          
 -. GEMS                                 No       Not Installed     -          
 -. GEMS Application                     No       Not Installed     -          
 -. Gene Expression                      No       Not Installed     -          
 -. Gene Expression Data                 No       Not Installed     -          
41. Generic                             Yes       Not Installed     Install    
 -. Imaging                              No       Not Installed     -          
 -. Imaging Advanced                     No       Not Installed     -          
 -. Imaging Advanced Data                No       Not Installed     -          
 -. Imaging Data                         No       Not Installed     -          
46. Integration                         Yes       Not Installed     Install    
47. Java Server                         Yes       Not Installed     None       
 -. App Launcher                         No       Not Installed     Embed      
 -. List Management and Query Services   No       Not Installed     -          
 -. List Management and Query Services Application   No       Not Installed     -          
 -. Mass Spec Proteomics                 No       Not Installed     -          
 -. Mass Spec Proteomics Data            No       Not Installed     -          
 -. Materials Studio                     No       Not Installed     -          
 -. Data Modeling                        No       Not Installed     -          
 -. Advanced Data Modeling               No       Not Installed     -          
 -. Next Gen Sequencing                  No       Not Installed     -          
 -. Next Gen Sequencing Data             No       Not Installed     -          
 -. Plate Data Analytics                 No       Not Installed     -          
 -. Polymer Properties (Synthia)         No       Not Installed     -          
60. Portlets                            Yes       Not Installed     Install    
61. Pipeline Pilot Client               Yes       Not Installed     Install    
 -. Query Service                        No       Not Installed     -          
 -. Registration                         No       Not Installed     -          
64. Reporting                           Yes       Not Installed     Install    
65. Reporting (Web Apps)                Yes       Not Installed     Install    
66. RSS Integration                     Yes       Not Installed     Install    
 -. R Statistics                         No       Not Installed     -          
 -. Sequence Analysis                    No       Not Installed     -          
 -. Sequence Analysis Data               No       Not Installed     -          
70. SharePoint Bridge                   Yes       Not Installed     Install    
 -. Text Analytics                       No       Not Installed     -          
 -. Web Application Framework            No       Not Installed     Embed      
73. Web Port                            Yes       Not Installed     Install    
74. Web Services                        Yes       Not Installed     Install    

Required Space: 1.10 GB, Available Space: 1572.90 GB Choose a package number to toggle its action (1-74)>>>[y] y

The server will use the following default ports: HTTP: 9944 HTTPS: 9943 To accept these default ports, press Y. To change these ports, press N. Accept default ports? (y or n) >>>[y] y

Enter the lock file directory path. >>>[/var/tmp] ENTER

If this machine is the primary node in a cluster, select a cluster method:

    1. This node is not in a cluster
    2. Round Robin
    3. Job Leveling

Choose (1-3)>>>[1] 1


Pipeline Pilot Server will perform the Install

   Version: 8.5.5
   Update ID: Collection Update 5
   Target Directory: /nfs/soft/ppilot
   Mutex Directory: /var/tmp/scitegic-mutexes-9944
   HTTP Port: 9944
   HTTPS Port: 9943
   Component collections to install:
       Core
       Admin Portal
       Chemistry
       Chemistry Advanced
       Database Content
       Chemistry Data
       Chemistry Molecular Toolkit
       Client SOAP SDK
       Client SDK - .NET
       Client SDK - Java
       Client SDK - JavaScript
       Core Utilities
       Data Access
       Platform Documentation
       Generic
       Integration
       Portlets
       Pipeline Pilot Client
       Reporting
       Reporting (Web Apps)
       RSS Integration
       SharePoint Bridge
       Web Port
       Web Services
   Component collections to embed:
       App Launcher
       Web Application Framework


Please wait while the installer initializes...

Deleting Packages

   /nfs/soft/ppilot/apps/scitegic

Installing Packages

   Copying Files for Core
   Copying Files for Admin Portal
   Copying Files for Chemistry
   Copying Files for Chemistry Advanced
   Copying Files for Database Content
   Copying Files for Chemistry Data
   Copying Files for Chemistry Molecular Toolkit
   Copying Files for Client SOAP SDK
   Copying Files for Client SDK - .NET
   Copying Files for Client SDK - Java
   Copying Files for Client SDK - JavaScript
   Copying Files for Core Utilities
   Copying Files for Data Access
   Copying Files for Platform Documentation
   Copying Files for Generic
   Copying Files for Integration
   Copying Files for App Launcher
   Copying Files for Portlets
   Copying Files for Pipeline Pilot Client
   Copying Files for Reporting
   Copying Files for Reporting (Web Apps)
   Copying Files for RSS Integration
   Copying Files for SharePoint Bridge
   Copying Files for Web Application Framework
   Copying Files for Web Port
   Copying Files for Web Services

Setting Permissions

   On directory /nfs/soft/ppilot

Preparing to back up xmldb Replacing Tokens Write token configuration file /nfs/soft/ppilot/install/tokens.config Preparing to Register Components Registering Shared Libraries

   libvcmath.so
   libvccore.so
   libwssoaputils.so
   libwsoldsoap.so
   libcsharpplugin.so
   libpcmjavaplugin.so
   libjpeg.so.62
   libuwin32.so
   libitfhelp.so
   libpcmperlplugin.so
   libwslocator.so
   libvcbase.so
   libvcparser.so
   libvcbaseclient.so
   libpluginexamples.so
   libpilot.so
   libwsxmldb.so
   libvcssl.so
   libpilotcore.so
   libpackaging.so
   libwsfile.so
   libwsrunner.so
   libremotewrappers2.so
   libjniutils.so
   libplugintemplate.so
   libxmldb.so
   libwsprotocol.so
   libpcmcomponents.so
   libwslog.so
   libxmlio.so
   liblpl.so
   libeasysoap.so

Deactivating Package

   /                                                                                                                   

Working on all packages for vendor \ : scitegic/admin scitegic/chemistry scitegic/chemistryadv scitegic/chemistrycontent scitegic/chemistrydata scitegic/chemistrytlkt scitegic/clientsdk scitegic/clientsdkdotnet scitegic/clientsdkjava scitegic/clientsdkjavascript scitegic/core scitegic/coreutils scitegic/dataaccess scitegic/docs scitegic/generic scitegic/integration scitegic/launcher scitegic/portlets scitegic/ppclient scitegic/report scitegic/reportadv scitegic/rss scitegic/sharepoint scitegic/waf scitegic/web scitegic/websvc

-- All components

   Unregistering Components and Protocols for all  packages

-- Package scitegic/websvc

-- Package scitegic/web

-- Package scitegic/waf

-- Package scitegic/sharepoint

-- Package scitegic/rss

-- Package scitegic/reportadv

-- Package scitegic/ppclient

-- Package scitegic/portlets

-- Package scitegic/launcher

-- Package scitegic/dataaccess

-- Package scitegic/integration

-- Package scitegic/coreutils

-- Package scitegic/clientsdkjavascript

-- Package scitegic/clientsdkjava

-- Package scitegic/clientsdkdotnet

-- Package scitegic/clientsdk

-- Package scitegic/chemistrytlkt

-- Package scitegic/chemistrydata

-- Package scitegic/chemistrycontent

-- Package scitegic/chemistryadv

-- Package scitegic/chemistry

-- Package scitegic/report

-- Package scitegic/admin

-- Package scitegic/generic

-- Package scitegic/docs

-- Package scitegic/core

   /

Deactivating Package

   scitegic/core                                                                                                       

-- Package scitegic/core

   scitegic/core

Activating Package

   scitegic/core                                                                                                       

++ Package scitegic/core

   Perl: "/nfs/soft/ppilot/apps/scitegic/core/localbin/cleanxmldbobjects.pl" "/nfs/soft/ppilot"
   Command: /nfs/soft/ppilot/linux_bin/DbUtil -ssl
   Merging configuration files
   Refreshing authorization roles
   Package installation successful.
   scitegic/core

Deactivating Package

   scitegic/docs                                                                                                       

-- Package scitegic/docs

   scitegic/docs

Activating Package

   scitegic/docs                                                                                                       

++ Package scitegic/docs

   Copying files
   Command: chmod a+x "/nfs/soft/ppilot/linux_bin/Help.cgi"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmhelp.so"
   Merging configuration files
   Package installation successful.
   scitegic/docs

Deactivating Package

   scitegic/generic                                                                                                    

-- Package scitegic/generic

   Unregistering Components and Protocols
   scitegic/generic

Activating Package

   scitegic/generic                                                                                                    

++ Package scitegic/generic

   Copying files
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libvcmodeling.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libvcodbc.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbasecalculators.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbasedatamodel.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbasegenerators.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbaseintegration.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbasescreens.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbasesources.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbaseui.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmbasewriters.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmlearn.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmrdbms.so"
   Merging configuration files
   Registering Components..........................................................................................................................................................................................................................................
   Registering Protocols........................................................................
   Package installation successful.
   scitegic/generic

Deactivating Package

   scitegic/admin                                                                                                      

-- Package scitegic/admin

   scitegic/admin

Activating Package

   scitegic/admin                                                                                                      

++ Package scitegic/admin

   Copying files
   Command: chmod a+x "/nfs/soft/ppilot/linux_bin/Admin.cgi"
   Merging configuration files
   Package installation successful.
   scitegic/admin

Deactivating Package

   scitegic/report                                                                                                     

-- Package scitegic/report

   Unregistering Components and Protocols
   scitegic/report

Activating Package

   scitegic/report                                                                                                     

++ Package scitegic/report

   Merging configuration files
   Registering Components..........................................................................................
   Registering Protocols...............................................
   Indexing documentation
   Package installation successful.
   scitegic/report

Deactivating Package

   scitegic/chemistry                                                                                                  

-- Package scitegic/chemistry

   Unregistering Components and Protocols
   scitegic/chemistry

Activating Package

   scitegic/chemistry                                                                                                  

++ Package scitegic/chemistry

   Copying files
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmchemcalculators.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmchemgenerators.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmchemscreens.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmchemsources.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmchemwriters.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libpcmchemmdl.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libxmliochem.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libvcdm.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/libvcdmutil.so"
   Merging configuration files
   Registering Components.......................................................................................................................................................................................................................................................................
   Registering Protocols........................................................................
   Indexing documentation
   Package installation successful.
   scitegic/chemistry

Deactivating Package

   scitegic/chemistryadv                                                                                               

-- Package scitegic/chemistryadv

   Unregistering Components and Protocols
   scitegic/chemistryadv

Activating Package

   scitegic/chemistryadv                                                                                               

++ Package scitegic/chemistryadv

   Merging configuration files
   Registering Components.................................................................
   Registering Protocols.................................................................
   Indexing documentation
   Package installation successful.
   scitegic/chemistryadv

Deactivating Package

   scitegic/chemistrycontent                                                                                           

-- Package scitegic/chemistrycontent

   Unregistering Components and Protocols
   scitegic/chemistrycontent

Activating Package

   scitegic/chemistrycontent                                                                                           

++ Package scitegic/chemistrycontent

   Merging configuration files
   Registering Components..................................
   Registering Protocols................
   Package installation successful.
   scitegic/chemistrycontent

Deactivating Package

   scitegic/chemistrydata                                                                                              

-- Package scitegic/chemistrydata

   scitegic/chemistrydata

Activating Package

   scitegic/chemistrydata                                                                                              

++ Package scitegic/chemistrydata

   Merging configuration files
   Package installation successful.
   scitegic/chemistrydata

Deactivating Package

   scitegic/chemistrytlkt                                                                                              

-- Package scitegic/chemistrytlkt

   Unregistering Components and Protocols
   scitegic/chemistrytlkt

Activating Package

   scitegic/chemistrytlkt                                                                                              

++ Package scitegic/chemistrytlkt

   Copying files
   Merging configuration files
   Registering Components.......
   Registering Protocols.......................
   Indexing documentation
   Package installation successful.
   scitegic/chemistrytlkt

Deactivating Package

   scitegic/clientsdk                                                                                                  

-- Package scitegic/clientsdk

   scitegic/clientsdk

Activating Package

   scitegic/clientsdk                                                                                                  

++ Package scitegic/clientsdk

   Merging configuration files
   Package installation successful.
   scitegic/clientsdk

Deactivating Package

   scitegic/clientsdkdotnet                                                                                            

-- Package scitegic/clientsdkdotnet

   scitegic/clientsdkdotnet

Activating Package

   scitegic/clientsdkdotnet                                                                                            

++ Package scitegic/clientsdkdotnet

   Merging configuration files
   Package installation successful.
   scitegic/clientsdkdotnet

Deactivating Package

   scitegic/clientsdkjava                                                                                              

-- Package scitegic/clientsdkjava

   scitegic/clientsdkjava

Activating Package

   scitegic/clientsdkjava                                                                                              

++ Package scitegic/clientsdkjava

   Merging configuration files
   Package installation successful.
   scitegic/clientsdkjava

Deactivating Package

   scitegic/clientsdkjavascript                                                                                        

-- Package scitegic/clientsdkjavascript

   scitegic/clientsdkjavascript

Activating Package

   scitegic/clientsdkjavascript                                                                                        

++ Package scitegic/clientsdkjavascript

   Merging configuration files
   Package installation successful.
   scitegic/clientsdkjavascript

Deactivating Package

   scitegic/coreutils                                                                                                  

-- Package scitegic/coreutils

   Unregistering Components and Protocols
   scitegic/coreutils

Activating Package

   scitegic/coreutils                                                                                                  

++ Package scitegic/coreutils

   Merging configuration files
   Registering Components.......
   Package installation successful.
   scitegic/coreutils

Deactivating Package

   scitegic/integration                                                                                                

-- Package scitegic/integration

   Unregistering Components and Protocols
   scitegic/integration

Activating Package

   scitegic/integration                                                                                                

++ Package scitegic/integration

   Merging configuration files
   Registering Components...........................................
   Registering Protocols..........................................
   Package installation successful.
   scitegic/integration

Deactivating Package

   scitegic/dataaccess                                                                                                 

-- Package scitegic/dataaccess

   Unregistering Components and Protocols
   scitegic/dataaccess

Activating Package

   scitegic/dataaccess                                                                                                 

++ Package scitegic/dataaccess

   Command: rm -f "/nfs/soft/ppilot/xmldb/Objects/JdbcDriver.xml"
   Merging configuration files
   Registering Components.....................................
   Registering Protocols.....................
   Package installation successful.
   scitegic/dataaccess

Deactivating Package

   scitegic/launcher                                                                                                   

-- Package scitegic/launcher

   Unregistering Components and Protocols
   scitegic/launcher

Embedding Package

   scitegic/launcher                                                                                                   

++ Package scitegic/launcher

   Merging configuration files
   Registering Protocols.
   Package installation successful.
   scitegic/launcher

Deactivating Package

   scitegic/portlets                                                                                                   

-- Package scitegic/portlets

   scitegic/portlets

Activating Package

   scitegic/portlets                                                                                                   

++ Package scitegic/portlets

   Merging configuration files
   Package installation successful.
   scitegic/portlets

Deactivating Package

   scitegic/ppclient                                                                                                   

-- Package scitegic/ppclient

   scitegic/ppclient

Activating Package

   scitegic/ppclient                                                                                                   

++ Package scitegic/ppclient

   Merging configuration files
   Package installation successful.
   scitegic/ppclient

Deactivating Package

   scitegic/reportadv                                                                                                  

-- Package scitegic/reportadv

   Unregistering Components and Protocols
   scitegic/reportadv

Activating Package

   scitegic/reportadv                                                                                                  

++ Package scitegic/reportadv

   Merging configuration files
   Registering Components....................................
   Registering Protocols.....................................................
   Indexing documentation
   Package installation successful.
   scitegic/reportadv

Deactivating Package

   scitegic/rss                                                                                                        

-- Package scitegic/rss

   Unregistering Components and Protocols
   scitegic/rss

Activating Package

   scitegic/rss                                                                                                        

++ Package scitegic/rss

   Merging configuration files
   Registering Components..........
   Registering Protocols...
   Indexing documentation
   Package installation successful.
   scitegic/rss

Deactivating Package

   scitegic/sharepoint                                                                                                 

-- Package scitegic/sharepoint

   Unregistering Components and Protocols
   scitegic/sharepoint

Activating Package

   scitegic/sharepoint                                                                                                 

++ Package scitegic/sharepoint

   Merging configuration files
   Registering Protocols..
   Indexing documentation
   Package installation successful.
   scitegic/sharepoint

Deactivating Package

   scitegic/waf                                                                                                        

-- Package scitegic/waf

   Unregistering Components and Protocols
   scitegic/waf

Embedding Package

   scitegic/waf                                                                                                        

++ Package scitegic/waf

   Merging configuration files
   Registering Components........................
   Registering Protocols..............
   Package installation successful.
   scitegic/waf

Deactivating Package

   scitegic/web                                                                                                        

-- Package scitegic/web

   scitegic/web

Activating Package

   scitegic/web                                                                                                        

++ Package scitegic/web

   Perl: "/nfs/soft/ppilot/apps/scitegic/web/customize/customize_webport.pl" "default" "-install" "-overwrite"
   Merging configuration files
   Refreshing authorization roles
   Indexing documentation
   Package installation successful.
   scitegic/web

Deactivating Package

   scitegic/websvc                                                                                                     

-- Package scitegic/websvc

   Unregistering Components and Protocols
   scitegic/websvc

Activating Package

   scitegic/websvc                                                                                                     

++ Package scitegic/websvc

   Copying files
   Command: chmod a+x "/nfs/soft/ppilot/linux_bin/Cache.cgi"
   Command: chmod a+x "/nfs/soft/ppilot/linux_bin/CgiFile.cgi"
   Command: chmod a+x "/nfs/soft/ppilot/linux_bin/libwsprotocoldoc.so"
   Command: chmod a+x "/nfs/soft/ppilot/linux_bin/libwsprotocolwsse.so"
   Command: chmod a+x "/nfs/soft/ppilot/linux_bin/libwsprotocol4wsdl.so"
   Command: "/nfs/soft/ppilot/linux_bin/regsvr" "/nfs/soft/ppilot/linux_bin/apache2servicemodules.so"
   Merging configuration files
   Registering Components...
   Package installation successful.
   scitegic/websvc

Starting Apache Starting Pipeline Pilot server on zeta.cluster.ucsf.bkslab.org... Refresh HTTPD configuration file: /nfs/soft/ppilot/apps/scitegic/core/packages_linux64/apache/httpd-2.2.16/conf/httpd-zeta.cluster.ucsf.bkslab.org.conf Check /nfs/soft/ppilot/logs/startservererror-zeta.cluster.ucsf.bkslab.org.txt

Done

FINISHED Setting permissions on installed files Creating link /nfs/soft/ppilot/apps/scitegic/core/packages_linux64/datadirect/locale/en_US.UTF-8 to ODBC driver messages


Installation complete.

NOTE: To configure the server for local authentication, impersonation or to install a boot script, run the scirootinstall script as root: /nfs/soft/ppilot/install/scripts/scirootinstall