New hartwig libraries: Difference between revisions
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** 2018-05-05: 195, 210 | ** 2018-05-05: 195, 210 | ||
* we hope | * we hope acquisition success (purchase + synthesis) will be at least 50%. Please keep track and let us know. | ||
Latest info in the "Hartwig" tab of the curation sheet, including description and size of each library: | |||
https://docs.google.com/spreadsheets/d/15c3SSevkfw2SJLDlZnuh64W6BZqYNhXfBgXKEHIZONE/edit?usp=sharing | https://docs.google.com/spreadsheets/d/15c3SSevkfw2SJLDlZnuh64W6BZqYNhXfBgXKEHIZONE/edit?usp=sharing | ||
Revision as of 22:09, 4 May 2018
Hartwig libraries are ready for docking as follows
- Each library is numbered <libnum>
- Libraries live in /nfs/ex6/hartwig/build/<libnum>
- complete "usual" sdi file is in /nfs/ex6/hartwig/build/<libnum>/sdi
- each db2.gz file referenced by the sdi has 1-100 molecules, so they are 1/10th the size of normal ZINC x???.db.gz files. Please adjust your database splitting accordingly.
- recipe for BB and reaction used to build can be decoded from /nfs/ex6/hartwig/reference/<libnum>-a.dict
- molecules are numbered H0xxx for <libnum> followed by 11 digits.
- if you show John Hartwig the line from the dict file, he knows how to buy cmpds and make it
- Each building block should be 100mg for $100 or less. Many are less.
- If you find a broken molecule or an expensive building block, please send the full compound number to me.
- Available libraries:
- 2018-05-03: 197, 202, 204, 212, 213
- 2018-05-05: 195, 210
- we hope acquisition success (purchase + synthesis) will be at least 50%. Please keep track and let us know.
Latest info in the "Hartwig" tab of the curation sheet, including description and size of each library:
https://docs.google.com/spreadsheets/d/15c3SSevkfw2SJLDlZnuh64W6BZqYNhXfBgXKEHIZONE/edit?usp=sharing
We can produce around 1 M molecules per day, which we will be doing for the next 2-3 weeks.
John