Decoys: Difference between revisions

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Decoys are important for judging the performance of [[molecular docking]] algorithms.  
Decoys are important for judging the performance of [[molecular docking]] algorithms.  


The [[DUD database]] is a free directory of useful decoys for [[virtual screening]].
If you want decoys for a molecule in ZINC, say 556, use
http://band.desktop.ucsf.bkslab.org:8088/substances/ZINC000000000556/decoys/3D.sdf
 
[[DUDE]] is a free directory of useful decoys for [[virtual screening]].


For more information on preparation see
For more information on preparation see

Revision as of 05:02, 11 June 2015

Decoys are...

Decoys are important for judging the performance of molecular docking algorithms.

If you want decoys for a molecule in ZINC, say 556, use

http://band.desktop.ucsf.bkslab.org:8088/substances/ZINC000000000556/decoys/3D.sdf

DUDE is a free directory of useful decoys for virtual screening.

For more information on preparation see

Automated_Database_Preparation#Automatic_Decoy_Generation