Difference between revisions of "DOCK 3.7"

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* [[Blastermaster]] - a program prepare input for and then run [[DOCK 3.7]], a molecular docking program.
 
* [[Blastermaster]] - a program prepare input for and then run [[DOCK 3.7]], a molecular docking program.
 
* [[Ligand preparation]] - programs to create dockable databases
 
* [[Ligand preparation]] - programs to create dockable databases
 +
* [[Getting started with DOCK_3.7]] - notes by JJI, work in progress.
  
 
= Protein preparation for docking =  
 
= Protein preparation for docking =  

Revision as of 11:24, 23 February 2014

DOCK 3.7 is available at http://dock.compbio.ucsf.edu/DOCK3.7/. It is the latest version in the DOCK 3 series of docking programs developed and used by the Shoichet Lab. To cite DOCK3.7 paper, please use Coleman, Carchia, Sterling, Irwin & Shoichet, PLOS ONE 2013.

Highest level scripts

Protein preparation for docking

Molecular library preparation for docking

Molecular docking

Analysis of Docking Results, including the use of decoys

Current cluster information pertaining to using DOCK 3.7


http://i.creativecommons.org/l/by-sa/3.0/88x31.png

This work is licensed under the Creative Commons Attribution-ShareAlike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/3.0/ This page is adapted from "DOCK3.7 Documentation" by Ryan G. Coleman. Based on a work at https://sites.google.com/site/dock37wiki/.