DOCK 3.7: Difference between revisions

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This is the documentation wiki for UCSF DOCK 3.7, which is available at:
DOCK 3.7 is available at [http://dock.compbio.ucsf.edu/DOCK3.7/ http://dock.compbio.ucsf.edu/DOCK3.7/].
 
It is the latest version in the [[DOCK 3]] series of docking programs developed and used by the [[Shoichet Lab]].
http://dock.compbio.ucsf.edu/DOCK3.7/
To cite DOCK3.7 paper, please use
 
The main DOCK3.7 paper, please read & cite:
[http://www.plosone.org/article/info:doi/10.1371/journal.pone.0075992 Coleman, Carchia, Sterling, Irwin & Shoichet, PLOS ONE 2013.]
[http://www.plosone.org/article/info:doi/10.1371/journal.pone.0075992 Coleman, Carchia, Sterling, Irwin & Shoichet, PLOS ONE 2013.]


= Topics =


 
* [[INDOCK 3.7]]
[[INDOCK 3.7]]
* [[mol2db2]] and [[mol2db2 format]]
 
* [[Ligand preparation]]
[[mol2db2]] and [[mol2db2 format]]
* [[Protein Target Preparation]] (Adding Static Waters to the Protein Structure) (Flexible Docking)
 
* [[ZINC Subset DB2 file locations]]
[[Ligand preparation]]
* [[Running DOCK 3.7]]
 
* [[Analyzing DOCK Results]]
[[Protein Target Preparation]] (Adding Static Waters to the Protein Structure) (Flexible Docking)
* [http://autodude.docking.org/ Auto-DUD-E Test Set] (external site)  
 
[[ZINC Subset DB2 file locations]]
 
[[Running DOCK 3.7]]
 
[[Analyzing DOCK Results]]
 
[http://autodude.docking.org/ Auto-DUD-E Test Set] (external site)  


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{{Template:Coleman}}
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OLD
DOCK 3.7 is the latest version of the [[DOCK 3]] series of docking programs used and developed by the [[Shoichet Laboratory]]. 


[[Category:DOCK 3.7]]
[[Category:DOCK 3.7]]
[[Category:DOCK 3]]
[[Category:DOCK]]
[[Category:Software]]

Revision as of 16:57, 14 February 2014

DOCK 3.7 is available at http://dock.compbio.ucsf.edu/DOCK3.7/. It is the latest version in the DOCK 3 series of docking programs developed and used by the Shoichet Lab. To cite DOCK3.7 paper, please use Coleman, Carchia, Sterling, Irwin & Shoichet, PLOS ONE 2013.

Topics

http://i.creativecommons.org/l/by-sa/3.0/88x31.png

This work is licensed under the Creative Commons Attribution-ShareAlike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/3.0/ This page is adapted from "DOCK3.7 Documentation" by Ryan G. Coleman. Based on a work at https://sites.google.com/site/dock37wiki/.

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