Difference between revisions of "DOCK 3.7"

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This is the documentation wiki for UCSF DOCK 3.7, which is available at:
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DOCK 3.7 is available at [http://dock.compbio.ucsf.edu/DOCK3.7/ http://dock.compbio.ucsf.edu/DOCK3.7/].
 
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It is the latest version in the [[DOCK 3]] series of docking programs developed and used by the [[Shoichet Lab]].
http://dock.compbio.ucsf.edu/DOCK3.7/
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To cite DOCK3.7 paper, please use
 
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The main DOCK3.7 paper, please read & cite:
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[http://www.plosone.org/article/info:doi/10.1371/journal.pone.0075992 Coleman, Carchia, Sterling, Irwin & Shoichet, PLOS ONE 2013.]
 
[http://www.plosone.org/article/info:doi/10.1371/journal.pone.0075992 Coleman, Carchia, Sterling, Irwin & Shoichet, PLOS ONE 2013.]
  
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= Topics =
  
 
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* [[INDOCK 3.7]]
[[INDOCK 3.7]]
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* [[mol2db2]] and [[mol2db2 format]]
 
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* [[Ligand preparation]]
[[mol2db2]] and [[mol2db2 format]]
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* [[Protein Target Preparation]] (Adding Static Waters to the Protein Structure) (Flexible Docking)
 
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* [[ZINC Subset DB2 file locations]]
[[Ligand preparation]]
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* [[Running DOCK 3.7]]
 
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* [[Analyzing DOCK Results]]
[[Protein Target Preparation]] (Adding Static Waters to the Protein Structure) (Flexible Docking)
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* [http://autodude.docking.org/ Auto-DUD-E Test Set] (external site)  
 
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[[ZINC Subset DB2 file locations]]
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[[Running DOCK 3.7]]
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[[Analyzing DOCK Results]]
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[http://autodude.docking.org/ Auto-DUD-E Test Set] (external site)  
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{{Template:CC-BY-SA-30}}
 
{{Template:CC-BY-SA-30}}
 
{{Template:Coleman}}
 
{{Template:Coleman}}
 
OLD
 
 
DOCK 3.7 is the latest version of the [[DOCK 3]] series of docking programs used and developed by the [[Shoichet Laboratory]]. 
 
 
 
  
 
[[Category:DOCK 3.7]]
 
[[Category:DOCK 3.7]]
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[[Category:DOCK 3]]
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[[Category:DOCK]]
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[[Category:Software]]

Revision as of 09:57, 14 February 2014

DOCK 3.7 is available at http://dock.compbio.ucsf.edu/DOCK3.7/. It is the latest version in the DOCK 3 series of docking programs developed and used by the Shoichet Lab. To cite DOCK3.7 paper, please use Coleman, Carchia, Sterling, Irwin & Shoichet, PLOS ONE 2013.

Topics

http://i.creativecommons.org/l/by-sa/3.0/88x31.png

This work is licensed under the Creative Commons Attribution-ShareAlike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/3.0/ This page is adapted from "DOCK3.7 Documentation" by Ryan G. Coleman. Based on a work at https://sites.google.com/site/dock37wiki/.