Difference between revisions of "DOCK 3.7"

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http://dock.compbio.ucsf.edu/DOCK3.7/
 
http://dock.compbio.ucsf.edu/DOCK3.7/
  
The main DOCK3.7 paper, please read & cite: Coleman, Carchia, Sterling, Irwin & Shoichet, PLOS ONE 2013. Additional citations
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The main DOCK3.7 paper, please read & cite:  
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[http://www.plosone.org/article/info:doi/10.1371/journal.pone.0075992
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Coleman, Carchia, Sterling, Irwin & Shoichet, PLOS ONE 2013.]
  
  
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DOCK 3.7 is the latest version of the [[DOCK 3]] series of docking programs used and developed by the [[Shoichet Laboratory]].   
 
DOCK 3.7 is the latest version of the [[DOCK 3]] series of docking programs used and developed by the [[Shoichet Laboratory]].   
  
*[http://www.plosone.org/article/info:doi/10.1371/journal.pone.0075992 paper]
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[[Category:DOCK]]
 
[[Category:DOCK]]

Revision as of 14:18, 13 February 2014

This is the documentation wiki for UCSF DOCK 3.7, which is available at:

http://dock.compbio.ucsf.edu/DOCK3.7/

The main DOCK3.7 paper, please read & cite: [http://www.plosone.org/article/info:doi/10.1371/journal.pone.0075992 Coleman, Carchia, Sterling, Irwin & Shoichet, PLOS ONE 2013.]


INDOCK

mol2db2 and mol2db2 format

Ligand Preparation

Protein Target Preparation (Adding Static Waters to the Protein Structure) (Flexible Docking)

ZINC Subset DB2 file locations

Running DOCK

Analyzing DOCK Results

Auto-DUD-E Test Set (external site)

http://i.creativecommons.org/l/by-sa/3.0/88x31.png

This work is licensed under the Creative Commons Attribution-ShareAlike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/3.0/ This page is adapted from "DOCK3.7 Documentation" by Ryan G. Coleman. Based on a work at https://sites.google.com/site/dock37wiki/.

OLD

DOCK 3.7 is the latest version of the DOCK 3 series of docking programs used and developed by the Shoichet Laboratory.